mirror of
https://github.com/NixOS/nixpkgs.git
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e9dbe1a2a3
Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/hdf5-threadsafe/versions. These checks were done: - built on NixOS - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5diff -h’ got 0 exit code - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5diff --help’ got 0 exit code - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5diff -V’ and found version 1.10.2 - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5diff --version’ and found version 1.10.2 - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5ls -h’ got 0 exit code - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5ls --help’ got 0 exit code - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5ls -V’ and found version 1.10.2 - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5ls --version’ and found version 1.10.2 - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5dump -h’ got 0 exit code - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5dump --help’ got 0 exit code - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5dump -V’ and found version 1.10.2 - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5dump --version’ and found version 1.10.2 - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5mkgrp -h’ got 0 exit code - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5mkgrp --help’ got 0 exit code - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5mkgrp -V’ and found version 1.10.2 - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5mkgrp --version’ and found version 1.10.2 - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5clear -h’ got 0 exit code - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5clear --help’ got 0 exit code - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5clear -V’ and found version 1.10.2 - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5clear --version’ and found version 1.10.2 - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5import -h’ got 0 exit code - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5import -V’ and found version 1.10.2 - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5repack -h’ got 0 exit code - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5repack --help’ got 0 exit code - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5repack -V’ and found version 1.10.2 - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5repack --version’ and found version 1.10.2 - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5jam -h’ got 0 exit code - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5jam --help’ got 0 exit code - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5jam -V’ and found version 1.10.2 - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5unjam -h’ got 0 exit code - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5unjam --help’ got 0 exit code - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5unjam -V’ and found version 1.10.2 - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5copy -h’ got 0 exit code - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5copy --help’ got 0 exit code - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5copy -V’ and found version 1.10.2 - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5copy --version’ and found version 1.10.2 - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5format_convert -h’ got 0 exit code - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5format_convert --help’ got 0 exit code - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5format_convert -V’ and found version 1.10.2 - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5format_convert --version’ and found version 1.10.2 - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5stat -h’ got 0 exit code - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5stat --help’ got 0 exit code - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5stat -V’ and found version 1.10.2 - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5stat --version’ and found version 1.10.2 - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5perf_serial help’ got 0 exit code - ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5cc --help’ got 0 exit code - found 1.10.2 with grep in /nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2 - directory tree listing: https://gist.github.com/aedb29e367d0b709b77bbdc794b96dd6
69 lines
2 KiB
Nix
69 lines
2 KiB
Nix
{ stdenv
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, fetchurl
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, gcc
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, removeReferencesTo
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, cpp ? false
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, gfortran ? null
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, zlib ? null
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, szip ? null
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, mpi ? null
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, enableShared ? true
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}:
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# cpp and mpi options are mutually exclusive
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# (--enable-unsupported could be used to force the build)
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assert !cpp || mpi == null;
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let inherit (stdenv.lib) optional optionals; in
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stdenv.mkDerivation rec {
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version = "1.10.2";
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name = "hdf5-${version}";
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src = fetchurl {
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url = "https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-1.10/${name}/src/${name}.tar.bz2";
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sha256 = "0wfb3w6dzi6zr2g1sdswqy9lxbp7yr4blvyi7k2xya7izmxmpb8w";
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};
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passthru = {
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mpiSupport = (mpi != null);
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inherit mpi;
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};
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nativeBuildInputs = [ removeReferencesTo ];
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buildInputs = []
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++ optional (gfortran != null) gfortran
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++ optional (szip != null) szip;
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propagatedBuildInputs = []
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++ optional (zlib != null) zlib
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++ optional (mpi != null) mpi;
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configureFlags = []
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++ optional cpp "--enable-cxx"
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++ optional (gfortran != null) "--enable-fortran"
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++ optional (szip != null) "--with-szlib=${szip}"
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++ optionals (mpi != null) ["--enable-parallel" "CC=${mpi}/bin/mpicc"]
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++ optional enableShared "--enable-shared";
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patches = [./bin-mv.patch];
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postInstall = ''
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find "$out" -type f -exec remove-references-to -t ${stdenv.cc} '{}' +
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'';
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meta = {
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description = "Data model, library, and file format for storing and managing data";
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longDescription = ''
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HDF5 supports an unlimited variety of datatypes, and is designed for flexible and efficient
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I/O and for high volume and complex data. HDF5 is portable and is extensible, allowing
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applications to evolve in their use of HDF5. The HDF5 Technology suite includes tools and
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applications for managing, manipulating, viewing, and analyzing data in the HDF5 format.
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'';
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license = stdenv.lib.licenses.free; # BSD-like
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homepage = https://www.hdfgroup.org/HDF5/;
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platforms = stdenv.lib.platforms.unix;
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broken = (gfortran != null) && stdenv.isDarwin;
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};
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}
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