Ryan Mulligan e7920cbcfc Merge pull request #64862 from r-ryantm/auto-update/picard-tools ... picard-tools: 2.20.2 -> 2.20.3		2019-07-16 20:04:43 -07:00
..
ants
aragorn	aragorn: init at 1.2.38 (#58354)	2019-04-29 07:18:03 -04:00
bcftools
bedtools
bftools
bowtie2	bowtie2: 2.3.5 -> 2.3.5.1	2019-05-01 11:17:16 +02:00
bwa
cd-hit	cd-hit: init at 4.8.1	2019-06-13 14:35:13 +02:00
clustal-omega
cmtk	treewide: make -Wno-error flags clang-only	2019-04-29 21:34:24 -04:00
conglomerate
dcm2niix	dcm2niix: 1.0.20170130 -> 1.0.20190410	2019-06-18 22:12:40 +02:00
diamond
ecopcr
eggnog-mapper	eggnog-mapper: fix patch URL and hash	2019-05-13 16:00:07 +02:00
emboss
exonerate
EZminc
freebayes
hisat2	hisat2: fix missing perl dependency	2019-07-05 10:29:51 +10:00
hmmer
igv
inormalize
itsx	treewide: fix redirect URLs	2019-07-10 12:52:51 -07:00
iv	iv: only use patchelf on linux	2019-06-05 23:42:58 -04:00
kallisto
megahit
messer-slim
migrate
minc-tools
minc-widgets
minimap2	minimap2: 2.16 -> 2.17	2019-05-11 21:12:42 -07:00
mni_autoreg
mosdepth	mosdepth: 0.2.3 -> 0.2.6	2019-06-22 22:41:59 +02:00
mrbayes
muscle
N3
ncbi-tools
neuron	pythonPackages.neuron: restrict to x86 platforms	2019-06-09 12:18:58 +02:00
niftyreg	treewide: remove unused variables (#63177)	2019-06-16 19:59:05 +00:00
niftyseg	treewide: remove unused variables (#63177)	2019-06-16 19:59:05 +00:00
octopus	octopus: init 0.6.3-beta	2019-06-19 23:09:33 +10:00
paml
picard-tools	picard-tools: 2.20.2 -> 2.20.3	2019-07-15 21:46:51 -07:00
platypus
plink
plink-ng
poretools
prodigal
raxml
samtools
seaview
snpeff
somatic-sniper
stacks	stacks: 2.3e -> 2.4	2019-05-24 03:50:06 -07:00
star	star: 2.7.0f -> 2.7.1a (#62577)	2019-06-06 18:10:34 +02:00
strelka
sumatools	treewide: remove unused variables (#63177)	2019-06-16 19:59:05 +00:00
varscan
vcftools