R. RyanTM c478b6217f samtools: 1.7 -> 1.8 ... Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/samtools/versions. These checks were done: - built on NixOS - ran ‘/nix/store/ip1zr4rg4pwq8f3fs8ar570l0zdicai7-samtools-1.8/bin/samtools --help’ got 0 exit code - ran ‘/nix/store/ip1zr4rg4pwq8f3fs8ar570l0zdicai7-samtools-1.8/bin/samtools help’ got 0 exit code - ran ‘/nix/store/ip1zr4rg4pwq8f3fs8ar570l0zdicai7-samtools-1.8/bin/blast2sam.pl -h’ got 0 exit code - ran ‘/nix/store/ip1zr4rg4pwq8f3fs8ar570l0zdicai7-samtools-1.8/bin/blast2sam.pl --help’ got 0 exit code - ran ‘/nix/store/ip1zr4rg4pwq8f3fs8ar570l0zdicai7-samtools-1.8/bin/blast2sam.pl help’ got 0 exit code - ran ‘/nix/store/ip1zr4rg4pwq8f3fs8ar570l0zdicai7-samtools-1.8/bin/novo2sam.pl help’ got 0 exit code - ran ‘/nix/store/ip1zr4rg4pwq8f3fs8ar570l0zdicai7-samtools-1.8/bin/psl2sam.pl -h’ got 0 exit code - ran ‘/nix/store/ip1zr4rg4pwq8f3fs8ar570l0zdicai7-samtools-1.8/bin/psl2sam.pl --help’ got 0 exit code - ran ‘/nix/store/ip1zr4rg4pwq8f3fs8ar570l0zdicai7-samtools-1.8/bin/psl2sam.pl help’ got 0 exit code - ran ‘/nix/store/ip1zr4rg4pwq8f3fs8ar570l0zdicai7-samtools-1.8/bin/soap2sam.pl -h’ got 0 exit code - ran ‘/nix/store/ip1zr4rg4pwq8f3fs8ar570l0zdicai7-samtools-1.8/bin/soap2sam.pl --help’ got 0 exit code - ran ‘/nix/store/ip1zr4rg4pwq8f3fs8ar570l0zdicai7-samtools-1.8/bin/soap2sam.pl help’ got 0 exit code - found 1.8 with grep in /nix/store/ip1zr4rg4pwq8f3fs8ar570l0zdicai7-samtools-1.8 - directory tree listing: https://gist.github.com/4673ea3645eb509035dcb386c4ad1da2		2018-04-10 13:04:09 -07:00
..
ants
bcftools	bcftools: python/perl is needed for shebangs	2018-04-08 09:35:20 +01:00
bedtools	bedtools: 2.26.0 -> 2.27.1	2018-01-22 12:09:44 +00:00
bowtie2	bowtie2: 2.3.4 -> 2.3.4.1	2018-02-25 09:45:04 -08:00
bwa	bwa: 0.7.16a -> 0.7.17	2018-01-22 01:58:36 +00:00
dcm2niix	dcm2niix: cmake is native, style	2018-01-15 16:53:28 +10:00
diamond
ecopcr
emboss
freebayes
igv	igv: 2.4.9 -> 2.4.10	2018-03-31 08:54:46 -07:00
iv
kallisto	kallisto: init at 0.43.1	2018-01-24 16:16:46 +00:00
minc-tools
mrbayes
muscle	muscle: init at 3.8.31	2018-01-28 12:32:46 +01:00
ncbi-tools
neuron
paml	paml: 4.9c -> 4.9g	2018-03-09 07:22:27 -08:00
picard-tools	picard-tools: 2.17.11 -> 2.18.1	2018-03-30 20:27:46 -07:00
platypus
plink
plink-ng
poretools
raxml	RAxML: init at 8.2.11 (SSE3 & MPI)	2018-02-02 18:31:40 +01:00
samtools	samtools: 1.7 -> 1.8	2018-04-10 13:04:09 -07:00
snpeff	snpeff: 4.3t -> 4.3q	2018-03-12 16:03:44 +11:00
star	star: init at 2.5.3a	2018-01-24 16:07:15 +00:00
varscan
vcftools