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nixpkgs/pkgs/applications/science/biology/emboss/default.nix
2017-03-13 13:15:51 +01:00

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Nix

{stdenv, fetchurl, readline, perl, libharu, libX11, libpng, libXt, zlib}:
stdenv.mkDerivation {
name = "emboss-6.6.0";
src = fetchurl {
url = "ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-6.6.0.tar.gz";
sha256 = "7184a763d39ad96bb598bfd531628a34aa53e474db9e7cac4416c2a40ab10c6e";
};
buildInputs = [ readline perl libharu libpng libX11 libXt zlib ];
configureFlags = [ "--with-hpdf=${libharu}" "--with-pngdriver=${zlib}" ];
postConfigure = ''
sed -i 's@$(bindir)/embossupdate@true@' Makefile
'';
meta = {
description = "The European Molecular Biology Open Software Suite";
longDescription = ''EMBOSS is a free Open Source software analysis package
specially developed for the needs of the molecular biology (e.g. EMBnet)
user community, including libraries. The software automatically copes with
data in a variety of formats and even allows transparent retrieval of
sequence data from the web.'';
license = "GPL2";
homepage = http://emboss.sourceforge.net/;
};
}