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nixpkgs/pkgs/applications/science/biology/slr/default.nix
Yury G. Kudryashov 75207a6a90 Try to update slr
Still fails to build because atlas doesn't provide full blas.

svn path=/nixpkgs/trunk/; revision=33164
2012-03-16 17:15:52 +00:00

24 lines
810 B
Nix

{stdenv, fetchurl, liblapack}:
stdenv.mkDerivation {
name = "slr-1.4.2";
src = fetchurl {
url = http://www.ebi.ac.uk/goldman-srv/SLR/download/v1.4.2/slr_source.tgz;
sha256 = "03ak7jsz89zism6gx8fr1dwlwjgcmnrr9m6xgqpr0xzikxid02jp";
};
buildInputs = [ liblapack ];
preConfigure = "mkdir bin; cd src";
makeFlags = "-f Makefile.linux";
meta = {
description = "Phylogenetic Analysis by Maximum Likelihood (PAML)";
longDescription = ''
SLR is a program to detect sites in coding DNA that are unusually conserved and/or unusually variable (that is, evolving under purify or positive selection) by analysing the pattern of changes for an alignment of sequences on an evolutionary tree.
'';
license = "GPL3";
homepage = http://www.ebi.ac.uk/goldman/SLR/;
};
}