| .. |
|
ants
|
ants: use itk 4.x
|
2019-09-13 11:54:21 +02:00 |
|
aragorn
|
|
|
|
bcftools
|
bcftools: 1.9 -> 1.10.2
|
2019-12-22 20:00:29 -08:00 |
|
bedtools
|
bedtools: 2.29.1 -> 2.29.2
|
2019-12-18 10:39:25 +11:00 |
|
bftools
|
bftools: 5.9.2 -> 6.3.0
|
2019-12-06 02:11:00 -08:00 |
|
bowtie2
|
|
|
|
bwa
|
|
|
|
cd-hit
|
|
|
|
clustal-omega
|
|
|
|
cmtk
|
|
|
|
conglomerate
|
|
|
|
dcm2niix
|
dcm2niix: 1.0.20190410 -> 1.0.20190902
|
2019-10-22 16:31:19 -07:00 |
|
deeptools
|
deeptools: init at 3.3.1
|
2019-11-04 02:42:36 -08:00 |
|
delly
|
delly: init at 0.8.1 (#70871)
|
2019-10-10 22:08:45 -04:00 |
|
diamond
|
|
|
|
ecopcr
|
|
|
|
eggnog-mapper
|
treewide: remove redundant quotes
|
2019-09-08 23:38:31 +00:00 |
|
emboss
|
|
|
|
est-sfs
|
|
|
|
exonerate
|
|
|
|
EZminc
|
EZminc: 2017-08-29 -> 2019-07-25; mark unbroken
|
2019-10-26 09:55:30 -07:00 |
|
freebayes
|
freebayes: 2017-08-23 -> 1.3.1 (2019-06-03)
|
2019-11-20 09:10:31 -08:00 |
|
hisat2
|
|
|
|
hmmer
|
hmmer: 3.2.1 -> 3.3
|
2019-11-27 18:40:23 -08:00 |
|
igv
|
maintainer: mimadrid: update github username and personal data
|
2019-09-14 12:15:46 +02:00 |
|
inormalize
|
|
|
|
itsx
|
|
|
|
iv
|
|
|
|
kallisto
|
kallisto: 0.46.0 -> 0.46.1 (#74430)
|
2019-11-30 21:12:54 +01:00 |
|
kssd
|
kssd: init at 1.0
|
2019-12-08 16:48:59 +01:00 |
|
last
|
last: 1042 -> 1045
|
2020-01-06 11:46:28 -08:00 |
|
macse
|
macse: init at 2.03
|
2019-09-24 08:24:07 +02:00 |
|
megahit
|
megahit: 1.1.4 -> 1.2.9
|
2019-11-02 15:53:57 +01:00 |
|
messer-slim
|
|
|
|
migrate
|
|
|
|
minc-tools
|
|
|
|
minc-widgets
|
|
|
|
minia
|
minia: init at 3.2.1
|
2019-12-20 11:27:04 +11:00 |
|
minimap2
|
|
|
|
mni_autoreg
|
|
|
|
mosdepth
|
|
|
|
mrbayes
|
|
|
|
muscle
|
|
|
|
N3
|
|
|
|
ncbi-tools
|
|
|
|
neuron
|
|
|
|
niftyreg
|
niftyreg: fix build with gcc9
|
2019-11-03 14:43:37 +01:00 |
|
niftyseg
|
nifticlib and niftseg: change platform from linux to unix since these build on OSX
|
2019-11-14 21:25:10 -05:00 |
|
octopus
|
|
|
|
paml
|
paml: 4.9i -> 4.9j
|
2019-12-01 18:43:58 +01:00 |
|
picard-tools
|
picard-tools: 2.21.1 -> 2.21.3 (#74528)
|
2019-11-30 16:24:44 +01:00 |
|
platypus
|
|
|
|
plink
|
|
|
|
plink-ng
|
|
|
|
poretools
|
|
|
|
prodigal
|
|
|
|
raxml
|
|
|
|
samtools
|
maintainer: mimadrid: update github username and personal data
|
2019-09-14 12:15:46 +02:00 |
|
seaview
|
|
|
|
snpeff
|
|
|
|
somatic-sniper
|
|
|
|
sortmerna
|
|
|
|
spades
|
SPAdes: init at 3.13.1 (#63082)
|
2019-10-03 09:18:48 +00:00 |
|
stacks
|
|
|
|
star
|
star: 2.7.2b -> 2.7.3a
|
2019-11-03 10:23:05 +01:00 |
|
strelka
|
strelka: fix build w/ gcc9
|
2019-12-30 03:18:19 +01:00 |
|
sumatools
|
treewide: replace make/build/configure/patchFlags with nix lists
|
2019-12-30 12:58:11 +01:00 |
|
svaba
|
svaba: init at 1.1.0
|
2019-12-08 14:51:05 +01:00 |
|
tebreak
|
tebreak: init at 1.0
|
2019-12-29 17:16:10 +11:00 |
|
trimal
|
|
|
|
truvari
|
truvari: init at 1.3.2 (#70877)
|
2019-10-24 17:06:42 -04:00 |
|
varscan
|
|
|
|
vcftools
|
|
|
|
xenomapper
|
xenomapper: init 1.0.2
|
2019-09-05 20:50:22 +10:00 |
