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nixpkgs/pkgs/applications/science/biology/clustal-omega/default.nix
Profpatsch 4a7f99d55d treewide: with stdenv.lib; in meta -> with lib;
Part of: https://github.com/NixOS/nixpkgs/issues/108938

meta = with stdenv.lib;

is a widely used pattern. We want to slowly remove
the `stdenv.lib` indirection and encourage people
to use `lib` directly. Thus let’s start with the meta
field.

This used a rewriting script to mostly automatically
replace all occurances of this pattern, and add the
`lib` argument to the package header if it doesn’t
exist yet.

The script in its current form is available at
https://cs.tvl.fyi/depot@2f807d7f141068d2d60676a89213eaa5353ca6e0/-/blob/users/Profpatsch/nixpkgs-rewriter/default.nix
2021-01-11 10:38:22 +01:00

33 lines
838 B
Nix

{ lib, stdenv, fetchurl, argtable }:
stdenv.mkDerivation rec {
version = "1.2.4";
pname = "clustal-omega";
src = fetchurl {
url = "http://www.clustal.org/omega/${pname}-${version}.tar.gz";
sha256 = "1vm30mzncwdv881vrcwg11vzvrsmwy4wg80j5i0lcfk6dlld50w6";
};
buildInputs = [ argtable ];
preConfigure = ''
for f in configure \
src/clustal-omega-config.h \
src/clustal-omega-config.h \
src/config.h.in \
src/mymain.c
do
sed -i -re 's/argtable2/argtable3/g' $f
done
'';
meta = with lib; {
description = "General purpose multiple sequence alignment program for protein and DNA/RNA";
homepage = "http://www.clustal.org/omega/";
license = licenses.gpl2;
maintainers = [ maintainers.bzizou ];
platforms = platforms.unix;
};
}