R. Ryantm 7c4e31bb4c igv: 2.16.0 -> 2.16.1		2023-05-31 13:33:15 +00:00
..
angsd
ants	ants: 2.4.3 -> 2.4.4	2023-05-02 12:29:21 -04:00
aragorn
astral
bayescan
bcftools
bedops	bedops: fix build on darwin	2023-04-24 22:11:47 +09:00
bedtools	bedtools: 2.30.0 -> 2.31.0	2023-04-29 03:05:55 +00:00
bftools
blast	blast: 2.13.0 -> 2.14.0	2023-05-26 00:23:49 +00:00
bowtie
bowtie2
bppsuite
bwa	bwa: add runHook	2023-05-15 16:13:49 +09:00
cd-hit
clustal-omega
cmtk
conglomerate
dcm2niix
deeptools
delly
diamond	diamond: 2.1.5 -> 2.1.6	2023-03-22 03:09:40 +00:00
dssp	dssp: 4.0.5 -> 4.2.2.1	2023-04-14 11:35:48 +09:00
ecopcr
eggnog-mapper
emboss
est-sfs
exonerate
EZminc
fastp	fastp: 0.23.2 -> 0.23.3	2023-05-15 15:03:24 +10:00
febio-studio
flywheel-cli
freebayes
gatk
genmap
hh-suite	hh-suite: init at 3.3.0	2023-04-19 10:32:35 +09:00
hisat2
hmmer
igv	igv: 2.16.0 -> 2.16.1	2023-05-31 13:33:15 +00:00
inormalize
iqtree	iqtree: 2.2.2.4 -> 2.2.2.6	2023-05-30 01:13:17 +00:00
itsx
iv
jbrowse	jbrowse: init at 2.5.0	2023-05-12 11:24:26 -07:00
kallisto
kent	kent: package headers too.	2023-05-06 19:48:14 +02:00
kssd
last	last: 1447 -> 1453	2023-04-03 08:38:27 +10:00
MACS2	treewide/applications: use top-level fetchPypi	2023-05-25 10:51:30 -04:00
macse
mafft	mafft: 7.515 -> 7.520	2023-04-12 13:28:24 +09:00
manta
megahit
meme-suite
messer-slim
migrate
minc-tools
minc-widgets
minia
minimap2	minimap2: 2.25 -> 2.26	2023-05-03 19:38:48 +00:00
mmseqs2
mni_autoreg
mosdepth
mrbayes
mrtrix
muscle
N3
nest
neuron
niftyreg
niftyseg
obitools
octopus
paml
picard-tools
platypus
plink-ng
poretools
prodigal
quast
raxml
repseek
sambamba
samblaster
samtools	Samtools: 1.13 -> 1.17	2023-04-12 12:00:25 +02:00
seaview
seqkit
seqtk	seqtk: 1.3 -> 1.4	2023-05-28 06:48:51 +00:00
snpeff
somatic-sniper
sortmerna
spades
sratoolkit
stacks
star
strelka
subread	subread: 2.0.5 -> 2.0.6	2023-05-10 22:30:35 +10:00
sumatools
svaba
tandem-aligner	tandem-aligner: add changelog to meta	2023-04-19 21:23:21 +09:00
tebreak
treemix
trf
trimal
truvari	truvari: add patches to fix truvari anno	2023-05-15 10:01:38 +09:00
varscan	varscan: 2.4.5 -> 2.4.6	2023-04-05 14:55:31 +00:00
vcftools
veryfasttree
whisper
xenomapper