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nixpkgs/pkgs/applications/science/biology/bowtie2/default.nix
2021-05-26 23:43:08 -07:00

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Nix

{ lib, stdenv, fetchFromGitHub, cmake, tbb, zlib }:
stdenv.mkDerivation rec {
pname = "bowtie2";
version = "2.4.4";
src = fetchFromGitHub {
owner = "BenLangmead";
repo = pname;
rev = "v${version}";
sha256 = "sha256-2B6w6c/qztyBb1jNA0zg+udQm41ouT1DyB6Ygpi5nC8=";
};
nativeBuildInputs = [ cmake ];
buildInputs = [ tbb zlib ];
meta = with lib; {
description = "An ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences";
license = licenses.gpl3;
homepage = "http://bowtie-bio.sf.net/bowtie2";
maintainers = with maintainers; [ rybern ];
platforms = platforms.all;
broken = stdenv.isAarch64; # only x86 is supported
};
}