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1097 commits

Author SHA1 Message Date
Michael Raskin 39ed261c4c Merge pull request #21632 from veprbl/sherpa_fix 
sherpa: fix sqlite dependency
 2017-01-09 09:58:22 +00:00
Dmitry Kalinkin 0f71012fe6
sherpa: add useful dependencies 2017-01-07 01:36:51 -05:00
Vladimír Čunát 07bf828bd9
Merge branch 'staging'; security /cc #21642 2017-01-06 16:32:47 +01:00
Gabriel Ebner 74a97421ce lean: 2016-12-30 -> 2017-01-06 2017-01-06 11:57:40 +01:00
Dmitry Kalinkin 2f23d60323 sherpa: fix sqlite dependency 2017-01-04 04:59:06 +00:00
Daiderd Jordan 27660cfdc0
Merge branch 'master' into staging 2017-01-04 01:42:26 +01:00
Domen Kožar af2cfc076f haskellPackages.z3: fix #16357 2017-01-03 23:10:24 +01:00
Michael Raskin 7c5784d1f0 maxima: 5.38.1 -> 5.39.0 2017-01-02 21:53:21 +01:00
Daiderd Jordan 5a67b130b9
Merge branch 'master' into staging 2017-01-02 00:54:17 +01:00
Dmitry Kalinkin c7bcb99ff2
root: 6.04.18 -> 6.08.02 
This relies on
e9d60c56 ('libc++3.7: fix to use with modern compilers')
 2017-01-01 17:52:03 -05:00
Pascal Wittmann 039e90c9d3
fityk: 1.3.0 -> 1.3.1 2017-01-01 18:19:39 +01:00
Gabriel Ebner 68b2d43c88 lean: 2016-12-08 -> 2016-12-30 2016-12-31 13:51:10 +01:00
Dmitry Kalinkin 8fb6895614
sherpa: init at 2.2.1 2016-12-30 14:27:55 -05:00
Michael Raskin e65cccb776 Merge pull request #21221 from rardiol/gplates 
gplates: init at 2.0.0
 2016-12-28 10:21:23 +00:00
mimadrid 29cb10c021
igv: 2.3.77 -> 2.3.89 2016-12-23 19:37:10 -05:00
John Wiegley 4888bfecc2
coq_8_6: 8.6 is now default, 8.4 optional, updated mathcomp/ssreflect 
Addresses #14829
 2016-12-22 10:35:56 -08:00
Jason Daniel Augustine Gilliland 59ca5d213f freebayes: init at 1.1.0 
Signed-off-by: zimbatm <zimbatm@zimbatm.com>
 2016-12-22 14:10:37 +00:00
ft@zeus 1b8aec421b
stellarium: 0.14.3 -> 0.15.0 
close #21271
 2016-12-21 20:22:44 -05:00
Ricardo Ardissone 662aa495df gplates: init at 2.0.0 2016-12-16 22:29:53 -02:00
John Wiegley 838a3b4294
coq_8_6: 8.6rc1 -> 8.6 2016-12-14 13:46:07 -08:00
John Wiegley 62934023c3
coq_HEAD: Update to the latest commit as of 2016-12-13 2016-12-13 08:09:23 -08:00
John Wiegley 360234dab6
coq_8_6: new package, based on Coq 8.6rc1 2016-12-13 07:27:15 -08:00
Eelco Dolstra c5b96ca801 minisat: Fix build on Darwin 2016-12-09 19:57:07 +01:00
Gabriel Ebner a2210a9efd lean: init at 2016-12-08 2016-12-08 10:30:28 -05:00
Gabriel Ebner ce2a9a8f9b lean2: 2016-07-05 -> 2016-11-29 
Renamed from lean since upstream renamed it as well.  The lean attribute
in nixpkgs will now refer to the new lean 3 version.
 2016-12-08 10:30:28 -05:00
Michael Raskin 3a98749bd1 pari: 2.9.0 -> 2.9.1 2016-12-08 16:15:18 +01:00
Vincent Laporte 431c564993 hol_light: fix build with Camlp5-6.17 2016-11-29 18:34:21 +00:00
Nicolò Balzarotti f390d68b75 yarp: 2.3.66.1 -> 2.3.68 2016-11-28 17:03:19 +01:00
Michael Raskin fcc5a4d3b8 Merge pull request #20672 from AndersonTorres/pari 
pari/gp: 2.7.6 -> 2.9.0
 2016-11-26 13:34:15 +00:00
Ole Krüger a31c37c759 [mathematica] 10.0.2 -> 11.0.1 2016-11-25 12:13:41 +01:00
AndersonTorres d395439a10 pari/gp: 2.7.6 -> 2.9.0 
Adding gp2c compiler, too.
 2016-11-24 22:44:56 -02:00
Vladimír Čunát 4c19651108
Merge #20264: root: fix environment setup 2016-11-14 22:27:09 +01:00
Justin Bedo a6d6a3972f
plink-ng: init at 1.90b3 2016-11-14 20:28:39 +11:00
Shea Levy 2ded9f3f7b coq: Improve emacs buffer handling 2016-11-13 14:01:01 -05:00
Austin Seipp 0bdc0143fe nixpkgs: proverif 1.94 -> 1.95 
Signed-off-by: Austin Seipp <aseipp@pobox.com>
 2016-11-10 03:45:51 +00:00
Frederik Rietdijk 3b5d5041ef Merge pull request #20267 from jbedo/master 
Fix bcftools installation prefix
 2016-11-09 21:57:46 +01:00
Gabriel Ebner 8c4aee4c79 z3: 4.4.1 -> 4.5.0 2016-11-08 16:14:16 -05:00
Justin Bedo ec31e2cc27
Fix bcftools installation prefix 2016-11-09 08:03:04 +11:00
Tim Steinbach 6d11e8ed4c
Remove pal2nal 
No longer build/exists
 2016-11-03 21:58:47 -04:00
Tim Steinbach c36a1d6502
paml: 4.2a -> 4.9c 2016-11-03 21:33:19 -04:00
Vincent Laporte b028b5f4ef coq-8.5: ease the selection of an older (patch level) version 2016-11-02 19:39:22 +01:00
Vincent Laporte b840da02cd coq: build and install the votour utility 2016-11-02 19:23:15 +01:00
Vincent Laporte da68cc24f0 coq: 8.5pl2 -> 8.5pl3 2016-11-02 19:23:15 +01:00
vbgl 7f241baaaf Merge pull request #19902 from dtzWill/update/yices 
yices: 2.3.1 -> 2.5.1
 2016-10-31 09:35:21 +01:00
Will Dietz 0443affe17 yices: Add darwin to meta.platforms 2016-10-30 13:38:07 -05:00
Dmitry Kalinkin 9434ec5441
root: fix environment setup 
1) s/envHook/postHook/
2) patch to not set $p that fixes nested ```nix-shell -p root``` calls
 2016-10-29 14:47:32 -04:00
Ertugrul Söylemez 9c8f6fb4fb pari-unstable: 2.8.0 -> 2.8.1, "alpha" -> "unstable". 2016-10-27 14:48:03 +02:00
Michael Raskin f9f23084d9 pari_alpha: fix source link 2016-10-27 12:17:16 +02:00
Will Dietz 3cf27a654a yices: Build in parallel, run tests, fix test shebang. 2016-10-26 13:01:21 -05:00
Will Dietz 8584ec97ed yices: fix install target by using 'true' as ldconfig 2016-10-26 12:59:34 -05:00