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1053 commits

Author SHA1 Message Date
Dan Peebles f285ce8fed twelf: fix emacs mode 2016-09-08 23:12:32 -04:00
Michael Raskin b924cdefa5 tptp: take into account upstream tarball hash change; one file got renamed and some statistics in the documentation got regenerated 2016-09-08 16:49:22 +02:00
obadz 2919375c91 minc_tools: don't run tests which have been failing since first pkged 2016-09-05 17:26:12 +01:00
Domen Kožar 9e363a752f openmodelica: enable parallel building
(cherry picked from commit 261d51971a)
Signed-off-by: Domen Kožar <domen@dev.si>
2016-09-05 18:06:28 +02:00
Joachim F 3d852770db Merge pull request #18164 from moyamo/geogebra
geogebra: 5.0.265.0 -> 5.0.271.0
2016-09-03 17:06:54 +02:00
Tuomas Tynkkynen 3364230d56 Disable bunch of non-compiling packages on Darwin
These ones have a "Last successful build" timestamp in the 2014s or
2015s. Presumably no one will notice if we now stop building them.

softether_4_18              2015-09-20  http://hydra.nixos.org/build/39418483
lensfun                     2014-09-30  http://hydra.nixos.org/build/39394104
net_snmp                    2015-09-20  http://hydra.nixos.org/build/39410553
djview                      2015-08-11  http://hydra.nixos.org/build/39413233
libmusicbrainz2             2015-09-20  http://hydra.nixos.org/build/39410106
fox_1_6                     2014-05-07  http://hydra.nixos.org/build/39410858
libofx                      2015-09-24  http://hydra.nixos.org/build/39423507
yacas                       2014-09-30  http://hydra.nixos.org/build/39393150
iomelt                      2014-09-30  http://hydra.nixos.org/build/39408486
softether                   2015-09-20  http://hydra.nixos.org/build/39425800
mp4v2                       2014-09-30  http://hydra.nixos.org/build/39421899
virtuoso7                   2014-09-21  http://hydra.nixos.org/build/39415206
man_db                      2015-04-23  http://hydra.nixos.org/build/39404236
libdiscid                   2014-09-30  http://hydra.nixos.org/build/39412202
zabbix22.agent              2014-09-21  http://hydra.nixos.org/build/39412149
vidalia                     2015-08-06  http://hydra.nixos.org/build/39411500
libmtp                      2015-09-20  http://hydra.nixos.org/build/39419199
wxGTK29                     2015-09-20  http://hydra.nixos.org/build/39415296
ncmpcpp                     2015-11-06  http://hydra.nixos.org/build/39404455
libtorrent                  2014-09-21  http://hydra.nixos.org/build/39394646
shishi                      2014-03-21  http://hydra.nixos.org/build/39418874
ocaml_3_12_1                2014-09-30  http://hydra.nixos.org/build/39392996
djview4                     2015-08-11  http://hydra.nixos.org/build/39427799
vimNox                      2014-05-23  http://hydra.nixos.org/build/39397012
ttfautohint                 2015-08-06  http://hydra.nixos.org/build/39398330
libraw                      2015-09-24  http://hydra.nixos.org/build/39402271
wxGTK30                     2015-09-20  http://hydra.nixos.org/build/39401871
sbcl_1_2_5                  2015-09-20  http://hydra.nixos.org/build/39426091
prover9                     2014-09-30  http://hydra.nixos.org/build/39406476
rcs                         2015-08-25  http://hydra.nixos.org/build/39392037
gpac                        2015-09-24  http://hydra.nixos.org/build/39399470
virtuoso6                   2014-09-30  http://hydra.nixos.org/build/39398651
xlslib                      2015-09-24  http://hydra.nixos.org/build/39410387
ucommon                     2015-03-27  http://hydra.nixos.org/build/39414040
commoncpp2                  2014-09-30  http://hydra.nixos.org/build/39420117
virtuoso                    2014-09-21  http://hydra.nixos.org/build/39399978
miniHttpd                   2014-09-30  http://hydra.nixos.org/build/39392925
mpack                       2014-09-26  http://hydra.nixos.org/build/39399535
nbd                         2014-09-26  http://hydra.nixos.org/build/39401367
newsbeuter-dev              2014-07-29  http://hydra.nixos.org/build/39406259
gimp_2_8                    2015-09-20  http://hydra.nixos.org/build/39436271
gimp                        2015-09-20  http://hydra.nixos.org/build/39435976
zabbix20.agent              2014-09-30  http://hydra.nixos.org/build/39393242
gst_all_1.gst-plugins-good  2015-09-20  http://hydra.nixos.org/build/39408506
ocaml_4_00_1                2014-09-30  http://hydra.nixos.org/build/39399526
inadyn                      2014-09-30  http://hydra.nixos.org/build/39426389
gst_all_1.gst-plugins-bad   2015-09-20  http://hydra.nixos.org/build/39392970
zabbix.agent                2014-09-30  http://hydra.nixos.org/build/39421412
cmake-2_8                   2015-09-24  http://hydra.nixos.org/build/39399443
liblastfm                   2015-08-06  http://hydra.nixos.org/build/39421812
newsbeuter                  2014-07-29  http://hydra.nixos.org/build/39396605
sdcv                        2014-09-26  http://hydra.nixos.org/build/39412928
2016-09-01 20:39:33 +03:00
Adrien Devresse 28d2d78b55 neuron: fix issue with incorrectly prefixed python path 2016-09-01 13:41:26 +02:00
Tuomas Tynkkynen 8c4aeb1780 Merge staging into master
Brings in:
    - changed output order for multiple outputs:
      https://github.com/NixOS/nixpkgs/pull/14766
    - audit disabled by default
      https://github.com/NixOS/nixpkgs/pull/17916

 Conflicts:
	pkgs/development/libraries/openldap/default.nix
2016-09-01 13:27:27 +03:00
Frederik Rietdijk 684f08166c fixup 2016-09-01 12:03:10 +02:00
Adrien Devresse ae2800378f neuron: fix issue #17914 -> Add python bindings to neuron derivation and minor fixes
- Add support for python bindings
- make neuron respect standard pythonpath prefix
- force exec_prefix == prefix to respect standard nix file hierarchy
- normalize indentation
- propagate dependencies necessary for nrniv_makefile usage
- Add support for darwin
2016-09-01 12:03:10 +02:00
Mohammed Yaseen Mowzer 921682a4d5 geogebra: 5.0.265.0 -> 5.0.271.0 2016-08-31 18:31:56 +02:00
Tuomas Tynkkynen b87a2245b1 root: Fix libc dev reference 2016-08-31 12:54:28 +03:00
Tuomas Tynkkynen d3dc3d4130 Merge remote-tracking branch 'dezgeg/shuffle-outputs' into staging
https://github.com/NixOS/nixpkgs/pull/14766
2016-08-30 12:43:37 +03:00
Tuomas Tynkkynen aef35c52f0 treewide: Fix output references to libX11 2016-08-30 03:40:23 +03:00
Tuomas Tynkkynen c3bcb4e1ce treewide: Use explicit 'dev' references to glibc 2016-08-30 03:11:09 +03:00
Vincent Laporte 17af87323d maxima: 5.36.1 -> 5.38.1 2016-08-29 15:52:05 +02:00
Robin Gloster 005a147f92
sage: fix build
closes #17842
2016-08-29 12:46:51 +00:00
obadz 57ddc155fc Merge branch 'master' into staging
Conflicts:
	pkgs/games/scummvm/default.nix
2016-08-28 12:20:59 +01:00
Gabriel Ebner 497b3cabcc libqalculate, qalculate-gtk: 0.9.8 -> 0.9.9 2016-08-28 10:40:33 +02:00
obadz 3de6e5be50 Merge branch 'master' into staging
Conflicts:
      pkgs/applications/misc/navit/default.nix
      pkgs/applications/networking/mailreaders/alpine/default.nix
      pkgs/applications/networking/mailreaders/realpine/default.nix
      pkgs/development/compilers/ghc/head.nix
      pkgs/development/libraries/openssl/default.nix
      pkgs/games/liquidwar/default.nix
      pkgs/games/spring/springlobby.nix
      pkgs/os-specific/linux/kernel/perf.nix
      pkgs/servers/sip/freeswitch/default.nix
      pkgs/tools/archivers/cromfs/default.nix
      pkgs/tools/graphics/plotutils/default.nix
2016-08-27 23:54:54 +01:00
Nikolay Amiantov 1db4cb750c gravit: fix build 2016-08-28 01:04:18 +03:00
Robin Gloster 9f80e55428
openmodelica: disable format hardening 2016-08-27 21:54:17 +00:00
Robin Gloster 191896e63a
qfsm: disable format hardening 2016-08-27 21:53:49 +00:00
Robin Gloster eddc0a5549
treewide: fix darwin builds by using getOutput
This fixes eval for pkgs referring to optional static output
2016-08-25 08:44:20 +00:00
Franz Pletz df275f5b85 treewide: fix darwin builds by referring to stdenv's libc 2016-08-25 02:56:25 +02:00
Robin Gloster f00c750014 qgroundcontrol: remove unused overrideCC and comment 2016-08-24 22:41:41 +00:00
Robin Gloster 13d7e83bf1 perseus: use default gcc 2016-08-24 22:41:41 +00:00
Robin Gloster bd44c7fd70 boolector: fix build with multiple outputs 2016-08-24 18:19:40 +00:00
obadz 0e8d2725dc Merge branch 'master' into staging 2016-08-23 18:50:06 +01:00
Tuomas Tynkkynen 282277dbc8 treewide: Use more makeBinPath 2016-08-23 01:18:10 +03:00
obadz 24a9183f90 Merge branch 'hardened-stdenv' into staging
Closes #12895

Amazing work by @globin & @fpletz getting hardened compiler flags by
enabled default on the whole package set
2016-08-22 01:19:35 +01:00
Michael Raskin 14736fcf4c openmodelica: fix libgfortran.so search 2016-08-20 21:52:21 +02:00
Austin Seipp cc7b072157 nixpkgs: abc-verifier 20160813 -> 20160818
Signed-off-by: Austin Seipp <aseipp@pobox.com>
2016-08-19 01:55:13 +00:00
Robin Gloster 99cb230b47 Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-08-14 09:09:20 +00:00
Austin Seipp 97e5b88d06 nixpkgs: abc-verifier 20150614 -> 20160813
Signed-off-by: Austin Seipp <aseipp@pobox.com>
2016-08-13 17:48:42 +00:00
Franz Pletz bd4490e277 Merge branch 'master' into hardened-stdenv 2016-08-13 16:59:55 +02:00
Luca Bruno 27f294f38d Merge pull request #17589 from cmfwyp/sagemath
sagemath: update mirrors, fix TeX Live dependency
2016-08-12 21:58:41 +01:00
Robin Gloster b7787d932e Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-08-12 09:46:53 +00:00
Robin Gloster 40d217b90e Merge pull request #17657 from matthewbauer/darwin-misc
Darwin misc. fixes
2016-08-11 16:41:34 +00:00
Michael Raskin d1951974df golly: 2.7 -> 2.8 2016-08-11 17:57:35 +02:00
Michael Raskin da4b7afea8 pari: 2.7.5 -> 2.7.6 2016-08-11 17:57:35 +02:00
Matthew Bauer 96322f6926 bcftools: fix darwin building
gcc not available
2016-08-10 22:48:19 -05:00
Matthew Bauer ee63056476 aspino: patch to use c++ instead of g++ 2016-08-10 22:29:18 -05:00
Matthew Bauer b3cb07e130 lie: only build on linux
Darwin build fails from conflicts in libSystem:

In file included from altdom.c:1:
In file included from /private/var/folders/7t/4vz31njj37b8y_bg6z3t7tk00000gn/T/nix-build-LiE-2.2.2.drv-0/LiE/lie.h:34:
In file included from /nix/store/9ll4m9yx854hr64fn1w9ra3qimm3pzdk-Libsystem-osx-10.9.5/include/string.h:176:
/nix/store/9ll4m9yx854hr64fn1w9ra3qimm3pzdk-Libsystem-osx-10.9.5/include/strings.h:73:7: error: redefinition of 'index' as different kind of symbol
char    *index(const char *, int) __POSIX_C_DEPRECATED(200112L);
         ^
/private/var/folders/7t/4vz31njj37b8y_bg6z3t7tk00000gn/T/nix-build-LiE-2.2.2.drv-0/LiE/lie.h:6:14: note: previous definition is here
typedef long index;
             ^
1 error generated.
2016-08-10 21:06:22 -05:00
Matthew Bauer d4b1289592 lie: LiE -> lie
Attributes need to be lowercase, see https://nixos.org/nixpkgs/manual/#sec-package-naming.
2016-08-10 21:04:16 -05:00
obadz 8df7571bbc geogebra: don't build on hydra since derivation just unpacks jars 2016-08-10 14:35:14 +01:00
Mohammed Yaseen Mowzer 04f0cb86d0 geogebra: init at 5.0.265.0
Closes #17400
2016-08-10 14:32:09 +01:00
cmfwyp 179d992427
sage: fix TeX Live input
The Sage derivation had texLive, the old TeX Live packaging which
is now marked as broken, as a build input. This replaces it by the
current TeX Live packaging.

However, the build remains broken. One of the problems can be
solved by patching the hashbangs at the beginning of build scripts,
but the build still gets stuck while building ncurses.
2016-08-07 23:18:47 -04:00
Tuomas Tynkkynen fdde95e096 msieve: Broken on i686
http://hydra.nixos.org/build/38236222
2016-08-06 17:06:45 +03:00
Tuomas Tynkkynen f87f37c1ee bwa: Broken on i686
http://hydra.nixos.org/build/38236956
2016-08-06 17:06:45 +03:00
Erik Rybakken 37aff96daf ripser: init at 1.0 (#17481) 2016-08-04 10:21:48 +02:00
Robin Gloster 1b979d8384 Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-08-03 13:34:44 +00:00
Tuomas Tynkkynen 21f17d69f6 treewide: Add lots of meta.platforms
Build-tested on x86_64 Linux & Mac.
2016-08-02 21:42:43 +03:00
Tuomas Tynkkynen 102ffa6be7 treewide: Wrap some really long package descriptions 2016-08-02 21:17:44 +03:00
Tuomas Tynkkynen 59ce911810 treewide: Some EOF-whitespace fixes 2016-08-02 21:17:44 +03:00
Tuomas Tynkkynen 1bf5ded193 treewide: Lots of meta.hydraPlatforms -> meta.platforms
In all of these files, there is no meta.platforms but only
meta.hydraPlatforms, which doesn't seem to have any purpose except being
inconsistent.
2016-08-02 21:17:44 +03:00
Robin Gloster 63c7b4f9a7 Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-07-31 20:51:34 +00:00
Robert Helgesson 8878e8ec05 leo2: remove use of builderDefsPackage (#17398) 2016-07-31 13:57:29 +02:00
Ram Kromberg 78d82f33ac alliance: 5.0 -> 5.1.1 (#17353) 2016-07-30 15:35:51 +01:00
Dmitry Kalinkin 4449ecb617 root: 6.04.16 -> 6.04.18 (#17265)
root: compile against external gsl

Revert "Revert "root: enable parallel building""

This reverts commit ee1a10ee6b.

ROOT has no problems with parallel build. The problems that caused the
original commit were not related to parallel building.
2016-07-30 01:41:37 +01:00
Robin Gloster 154af9e67d Merge pull request #9499 from khumba/scilab-bin-5
scilab-bin: init at 5.5.2
2016-07-28 16:43:08 +02:00
Marco Maggesi c28eb6c2ba Update HOL Light to version 2016-07-23. 2016-07-28 15:56:20 +02:00
Bryan Gardiner ed071594e5
scilab-bin: init at 5.5.2
A built-from-source Scilab 5 package looks to be a lot more work, and some
dependencies are missing from Nixpkgs, but the binary version with bundled
dependencies works.
2016-07-27 21:30:12 -07:00
Gabriel Ebner f970bc67c7 lean: 20160117 -> 2016-07-05
Fixes #17260.
2016-07-27 11:01:45 +02:00
Robin Gloster f222d98746 Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-07-25 12:47:13 +00:00
Gabriel Ebner 9082476478 cvc4: 1.4 -> 1.5pre-smtcomp2016 2016-07-24 13:11:17 +02:00
Robert Helgesson 1012508356 stellarium: 0.14.2 -> 0.14.3 2016-07-22 23:13:35 +02:00
Robert Helgesson 1bedecb4f9 stellarium: wrap binary using wrapQtProgram
Fixes #13582 where Stellarium segfaults when starting.
2016-07-22 22:21:17 +02:00
Gabriel Ebner 82f087944b metis-prover: 2.3.20160102 -> 2.3.20160713 2016-07-21 18:41:26 +02:00
Robin Gloster 203846b9de Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-07-19 10:37:02 +00:00
Gabriel Ebner 530a9ab981 Merge remote-tracking branch 'vbgl/why3-0.87.1' 2016-07-18 13:33:50 +02:00
Ben Darwin a896233396 jags: 3.4.0 -> 4.1.0 (#16804)
* jags: 3.4.0 -> 4.1.0
* unbreak rjags and dependent packages
2016-07-18 13:11:18 +02:00
vbgl d7cfdc581c coq: 8.5pl1 -> 8.5pl2 (#16863) 2016-07-18 11:33:51 +02:00
Nikolay Amiantov aefd8c420c Merge pull request #17043 from womfoo/fix/qmake4Hook-builds
reintroduce qmake .pro files after qmake4Hook changes
2016-07-18 00:11:24 +04:00
Kranium Gikos Mendoza dd778f1756 fritzing: fix qmake4Hook build
pass phoenix.pro and return unpack logic which were removed in 0b88755
2016-07-17 22:40:27 +08:00
Joachim F d9701350f9 Merge pull request #16951 from heilkn/lie
LiE: include forgotten file INFO.a by installation
2016-07-16 19:54:23 +02:00
Michael Raskin 61a3610853 tptp: 6.3.0 -> 6.4.0 2016-07-16 11:34:32 +02:00
Konstantin Heil c0656fe0c1 LiE: include forgotten file INFO.a by installation 2016-07-14 14:18:57 +02:00
Franz Pletz 26dd9acba5 Merge remote-tracking branch 'origin/master' into hardened-stdenv 2016-07-09 13:21:28 +02:00
Konstantin Heil b92c429799 LiE: init at 2.2.2 2016-06-30 21:04:41 +02:00
Vladimír Čunát 3afa246038 Merge branch 'staging'
This includes a security update of expat.
2016-06-29 07:47:04 +02:00
Austin Seipp 25bf4a5634 cryptoverif: init at 1.22
Signed-off-by: Austin Seipp <aseipp@pobox.com>
2016-06-28 04:37:29 +00:00
Austin Seipp a69799c740 statverif: init at 1.86pl4
Signed-off-by: Austin Seipp <aseipp@pobox.com>
2016-06-28 04:36:11 +00:00
Austin Seipp be19637b2a proverif: init at 1.94
Signed-off-by: Austin Seipp <aseipp@pobox.com>
2016-06-28 04:36:11 +00:00
Ta'iř sj Ořit 3832ebde8b gephi: init at 0.9.1 (#16071) 2016-06-26 22:40:00 +02:00
mimadrid 5c7a75412e
igv: init at 2.3.77 2016-06-26 19:27:56 +02:00
Joachim Fasting 46b07b335b Merge pull request #16379 from mimadrid/init/bcftools-1.3.1
bcftools: init at 1.3.1
2016-06-24 22:15:51 +02:00
mimadrid d91d245f16
bcftools: init at 1.3.1 2016-06-24 21:08:17 +02:00
mimadrid 14feec44e4
samtools: refactoring 2016-06-24 21:08:17 +02:00
Vladimír Čunát 6b27ceb006 Merge 'master' into staging and re-revert merge
... from staging to master, reverted temporarily in aa9a04883e.
2016-06-23 12:09:03 +02:00
Vladimír Čunát aa9a04883e Revert "Merge branch 'staging'" due to glibc
The main output started to retain dependency on bootstrap-tools; see
https://github.com/NixOS/nixpkgs/pull/15867#issuecomment-227949096

This reverts commit c05d829598, reversing
changes made to f073df60d6.
2016-06-23 09:25:10 +02:00
Vladimír Čunát c05d829598 Merge branch 'staging' 2016-06-22 10:49:56 +02:00
Gabriel Ebner 0a8e613cea aspino: init at 2016-01-31 2016-06-21 13:55:28 +02:00
Gabriel Ebner 8f84a5cb08 glucose, glucose-syrup: init at 4.0 2016-06-21 13:26:51 +02:00
Gabriel Ebner 9c5588e99f spass: 3.7 -> 3.9 2016-06-21 08:18:20 +02:00
Michael Raskin ca495a53a5 tptp: fix hash 2016-06-20 18:38:08 +02:00
Bjørn Forsman bd01fad0ed Captialize meta.description of all packages
In line with the Nixpkgs manual.

A mechanical change, done with this command:

  find pkgs -name "*.nix" | \
      while read f; do \
          sed -e 's/description\s*=\s*"\([a-z]\)/description = "\u\1/' -i "$f"; \
      done

I manually skipped some:

* Descriptions starting with an abbreviation, a user name or package name
* Frequently generated expressions (haskell-packages.nix)
2016-06-20 13:55:52 +02:00
Gabriel Ebner 727716cd82 speedcrunch: 0.11-alpha -> 0.11 2016-06-19 18:45:04 +02:00
Gabriel Ebner e5b3b685f4 libqalculate, qalculate-gtk: 0.9.7 -> 0.9.8 2016-06-19 17:33:45 +02:00
Gabriel Ebner cc0b3bbcc2 minisat: support clang 2016-06-19 15:19:25 +02:00