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Author SHA1 Message Date
Sandro dd33fd3a84
Merge pull request #105327 from danieldk/python-blis-0.7.3 2020-11-30 13:26:51 +01:00
R. RyanTM ef116c9eac python37Packages.colander: 1.8.2 -> 1.8.3 2020-11-30 12:17:27 +00:00
Sandro cc10a8229f
Merge pull request #105409 from jbedo/bwa
bwa: expand supported platforms
2020-11-30 13:14:43 +01:00
Sandro 062556f228
Merge pull request #105414 from r-ryantm/auto-update/python3.7-Wand
python37Packages.Wand: 0.6.4 -> 0.6.5
2020-11-30 13:10:04 +01:00
Sandro ca33e60d44
Merge pull request #105350 from r-ryantm/auto-update/python2.7-bsddb3
python27Packages.bsddb3: 6.2.7 -> 6.2.9
2020-11-30 13:00:27 +01:00
Sandro de9202b76b
Merge pull request #105375 from r-ryantm/auto-update/python2.7-bumps
python27Packages.bumps: 0.7.16 -> 0.7.18
2020-11-30 12:58:52 +01:00
Ben Siraphob d3287cdd0a octave: 5.2.0 -> 6.1.0 2020-11-30 18:27:11 +07:00
Farid Zakaria 4af8bc084a
buildRubyGem: fix to support bundler cmds (#104977)
The way in which Nixpks builds Ruby gems means that certain operations
by bundler *will not work*, namely `bundle install --redownload`.

According to the source the _cache/_ directory should have been kept,
however it seems through revisions to the file it has been purged.

Here was the comment from the original commit that introduced
buildRubyGem:
```
  # Note:
  #   We really do need to keep the $out/${ruby.gemPath}/cache.
  #   This is very important in order for many parts of RubyGems/Bundler to not blow up.
  #   See https://github.com/bundler/bundler/issues/3327
```

Why is the _cache_ directory needed?

Bundler and RubyGems uses the cache as a source of truth.
When bundler executes `bundler install --redownload`, any gems it
discovers in the _GEM_PATH_ it assums must have their _.gem_ file
present in the cache (unaware it was installed from Nix).

Rather than downloading the gem from RubyGems the bundler code forcibly
re-installs the gem from the cache directory instead and **fails** if it
does not exist.

I've opened https://github.com/rubygems/rubygems/issues/4088 to see if
this failure should be soft and not so explicit; or fallback to fetching
the gem from scratch.

Without this change the following is the error:
```bash
> [nix-shell:~/code/nix/playground/jruby-bundler-rake]$ bundle install --force
[DEPRECATED] The `--force` option has been renamed to `--redownload`
WARNING: An illegal reflective access operation has occurred
WARNING: Illegal reflective access by org.jruby.ext.openssl.SecurityHelper (file:/nix/store/fis6nzrpw9pmcivr84qh5byfgm07qn10-jruby-9.2.13.0/lib/ruby/stdlib/jopenssl.jar) to field java.security.MessageDigest.provider
WARNING: Please consider reporting this to the maintainers of org.jruby.ext.openssl.SecurityHelper
WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
WARNING: All illegal access operations will be denied in a future release
Fetching gem metadata from https://rubygems.org/.
Using bundler 2.1.4
Installing hello-world 1.2.0
Bundler::GemNotFound: Could not find hello-world-1.2.0.gem for installation
An error occurred while installing hello-world (1.2.0), and Bundler
cannot continue.
Make sure that `gem install hello-world -v '1.2.0' --source
'https://rubygems.org/'` succeeds before bundling.
```

Wth the fix the following no woccurs:
```bash
[nix-shell:~/code/nix/playground/jruby-bundler-rake]$ bundle install --redownload
WARNING: An illegal reflective access operation has occurred
WARNING: Illegal reflective access by org.jruby.ext.openssl.SecurityHelper (file:/nix/store/69wjlj4yirp48rv1q03zxgd4xvf0150d-jruby-9.2.13.0/lib/ruby/stdlib/jopenssl.jar) to field java.security.MessageDigest.provider
WARNING: Please consider reporting this to the maintainers of org.jruby.ext.openssl.SecurityHelper
WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
WARNING: All illegal access operations will be denied in a future release
Fetching gem metadata from https://rubygems.org/.
Using bundler 2.1.4
Installing hello-world 1.2.0
Bundle complete! 1 Gemfile dependency, 2 gems now installed.
Use `bundle info [gemname]` to see where a bundled gem is installed.
```

```
[nix-shell:~/code/nix/playground/jruby-bundler-rake]$ ls -l /nix/store/cwl9n5073hqgpfhnw4wic13nrrgg9dn8-gem-env/lib/jruby/gems/2.5.0/cache/
total 8
lrwxrwxrwx 1 fmzakari primarygroup 102 Dec 31  1969 bundler-2.1.4.gem -> /nix/store/ifc8a0gsfkrhkv953rd4rz8bcspahi8y-bundler-2.1.4/lib/jruby/gems/2.5.0/cache/bundler-2.1.4.gem
lrwxrwxrwx 1 fmzakari primarygroup 110 Dec 31  1969 hello-world-1.2.0.gem -> /nix/store/xi9ln6n1mz2is5ppykjxqhhkpjq9zm6i-hello-world-1.2.0/lib/jruby/gems/2.5.0/cache/hello-world-1.2.0.gem
```

I have a minimal project that demonstrates this issue at https://github.com/fzakaria/jruby-bundler-nix-failure
2020-11-30 12:15:12 +01:00
adisbladis a52850e304
Merge pull request #105113 from adisbladis/pythonforbuild-overrides
python: Propagate packageOverrides to pythonForBuild
2020-11-30 11:41:58 +01:00
Maximilian Bosch b516a09d46
Merge pull request #104603 from siraben/errcheck-update
errcheck: 1.1.0 -> 1.4.0
2020-11-30 11:36:33 +01:00
Maximilian Bosch b74f180181
Merge pull request #105421 from RaghavSood/aleth/delete
cpp_ethereum: remove
2020-11-30 11:30:16 +01:00
0x4A6F 7a6405448d
routinator: 0.8.0 -> 0.8.1 2020-11-30 10:18:04 +00:00
adisbladis 49b8738a5f
python: Propagate packageOverrides to pythonForBuild
When overriding versions of build tools injected via hooks
`packageOverrides` was not taken into account and 2 incompatible
versions of the same package (`wheel` in this case) ended up in the
closure, causing the builds to fail.
2020-11-30 11:12:59 +01:00
R. RyanTM 1a4e03072c python37Packages.vispy: 0.6.5 -> 0.6.6 2020-11-30 09:51:10 +00:00
Maximilian Bosch ee3c23e0a3
documize-community: 3.8.1 -> 3.8.2
https://github.com/documize/community/releases/tag/v3.8.2
2020-11-30 10:36:24 +01:00
R. RyanTM e53c0f98f7 python37Packages.pymavlink: 2.4.12 -> 2.4.13 2020-11-30 09:16:42 +00:00
R. RyanTM 1ddae1e4bf python37Packages.pybullet: 3.0.6 -> 3.0.7 2020-11-30 09:08:34 +00:00
Pavol Rusnak 24eb3f87fc
Merge pull request #105130 from Th0rgal/master
ledger-live-desktop: 2.16.0 -> 2.17.1
2020-11-30 09:33:03 +01:00
R. RyanTM 7f27852831 python37Packages.smart_open: 4.0.0 -> 4.0.1 2020-11-30 08:17:34 +00:00
R. RyanTM 524c24ceb8 python37Packages.blessed: 1.17.11 -> 1.17.12 2020-11-30 07:26:59 +00:00
Vincent Laporte 389ac5f00e ocamlPackages.batteries: 3.1.0 → 3.2.0 2020-11-30 08:13:28 +01:00
R. RyanTM 53408c2cf9 python37Packages.mac_alias: 2.1.0 -> 2.1.1 2020-11-30 06:50:37 +00:00
Wil Taylor b6bca3d806
doc/Qt: migrate to CommonMark (#105004)
* Updated QT section

* Fixed trailing whitespace

* Update doc/languages-frameworks/qt.section.md

Co-authored-by: Jan Tojnar <jtojnar@gmail.com>

* Update doc/languages-frameworks/qt.section.md

Co-authored-by: Jan Tojnar <jtojnar@gmail.com>

* Made changes to docs as per jtojnar's review

* Added docbook tags for callouts back in

Co-authored-by: Jan Tojnar <jtojnar@gmail.com>
2020-11-29 20:30:29 -08:00
R. RyanTM 3b1b6510e3 python37Packages.pytest-metadata: 1.10.0 -> 1.11.0 2020-11-29 20:07:21 -08:00
Raghav Sood 1fd8d571ed
cpp_ethereum: remove 2020-11-30 03:23:21 +00:00
Sandro ea3561228d
Merge pull request #105387 from freezeboy/unbreak-py2-ecpy
python2Packages.ecpy: unbreak due to invalid code
2020-11-30 04:05:14 +01:00
Mario Rodas 04238cf7f7
Merge pull request #104941 from r-ryantm/auto-update/axel
axel: 2.17.9 -> 2.17.10
2020-11-29 21:42:16 -05:00
Mario Rodas f180a29b03
Merge pull request #105403 from r-ryantm/auto-update/python2.7-ijson
python27Packages.ijson: 3.1.2.post0 -> 3.1.3
2020-11-29 21:29:13 -05:00
Mario Rodas 4572d27853
Merge pull request #105416 from r-ryantm/auto-update/python3.7-jupyterlab_git
python37Packages.jupyterlab-git: 0.23.1 -> 0.23.2
2020-11-29 21:24:53 -05:00
Martin Weinelt ec433df657
Merge pull request #105413 from ryantm/updatereadme
readme: update reference to number of packages
2020-11-30 03:07:20 +01:00
Sandro c64538b659
Merge pull request #105348 from Mic92/httpbin
python3.pkgs.httpbin: 0.6.2 -> 0.7.0
2020-11-30 02:30:07 +01:00
Sandro b678eab5d8
Merge pull request #105389 from oyren/portfolio-0.49.3
portfolio: 0.49.2 -> 0.49.3
2020-11-30 02:29:35 +01:00
Sandro 9d5d6b0a26
Merge pull request #104807 from SuperSandro2000/auto-update/python3.7-b2sdk 2020-11-30 02:13:30 +01:00
Sandro 142bd18593
Merge pull request #105408 from RonanMacF/master
vimPlugins.nvim-ts-rainbow: init at 2020-11-25
2020-11-30 02:03:13 +01:00
Sandro 5c9051e211
Merge pull request #105404 from jupblb/add-glow-nvim 2020-11-30 02:01:33 +01:00
R. RyanTM 6e1c706c00 python37Packages.jupyterlab-git: 0.23.1 -> 0.23.2 2020-11-30 00:53:15 +00:00
Sandro e065cbf01c
Merge pull request #105386 from arnarg/tmux-jump
tmuxPlugins.jump: init at 2020-06-26
2020-11-30 01:42:52 +01:00
Sandro 26c543168c
Merge pull request #105352 from r-ryantm/auto-update/python2.7-dependency-injector
python27Packages.dependency-injector: 4.4.1 -> 4.5.1
2020-11-30 01:34:36 +01:00
R. RyanTM 4958f5060b python37Packages.Wand: 0.6.4 -> 0.6.5 2020-11-30 00:23:02 +00:00
Ryan Mulligan 82657dc074 readme: update reference to number of packages
We updated the top of the readme to reference 60,000, but we forgot to
update this reference. This changes it so it won't become invalid for
a bit.
2020-11-29 16:18:12 -08:00
Dennis Gosnell a2b278f095
Merge pull request #105400 from arcz/libff
libff: init at 1.0.0
2020-11-30 09:08:26 +09:00
Ryan Mulligan db4f3eafb0
Merge pull request #105302 from AndersonTorres/wip-kakoune
Convert Kakoune documentation from XML DocBook to Commonmark
2020-11-29 15:51:41 -08:00
jupblb 49528362eb
vimPlugins.glow-nvim: init at 2020-08-31 2020-11-30 00:49:23 +01:00
Sandro 438679e1fb
Merge pull request #105361 from stigtsp/package/perl-crypt-perl-init 2020-11-30 00:39:13 +01:00
AndersonTorres 25b8aa4a85 Convert Kakoune documentation from XML DocBook to Commonmark 2020-11-29 20:19:28 -03:00
Justin Bedo 5fc6258043
bwa: expand supported platforms 2020-11-30 09:46:51 +11:00
Sandro e23f098b69
Merge pull request #105381 from arnarg/tmux-tilish
tmuxPlugins.tilish: init at 2020-08-12
2020-11-29 23:30:58 +01:00
RonanMacF 2724d807c9 vimPlugins.nvim-ts-rainbow: init at 2020-11-25 2020-11-29 22:29:34 +00:00
R. RyanTM e15ce6b6fa python27Packages.ijson: 3.1.2.post0 -> 3.1.3 2020-11-29 22:23:32 +00:00
jupblb 09d73e29df
vimPlugins: update 2020-11-29 23:23:11 +01:00