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413 commits

Author SHA1 Message Date
Peter Simons c5563b48ba R: set TZDIR properly to fix test suite 2017-03-07 14:56:46 +01:00
Peter Simons 6b3eec627e R: include output of sessionInfo() in the "make check" log 
The R developers would like that information to be included in bug
reports.
 2017-03-07 14:56:46 +01:00
Peter Simons fac139e723 R: update to version 3.3.3 2017-03-07 14:56:46 +01:00
Thomas Tuegel 28cb067600
fricas: 1.2.2 -> 1.3.1 2017-03-02 19:39:55 -06:00
Domen Kožar 4ccb553b70 Merge pull request #22817 from jbedo/r 
R: 3.2.4 -> 3.3.2
 2017-02-27 14:02:13 +01:00
Justin Bedo 4bb8727284
R: 3.2.4 -> 3.3.2 2017-02-24 15:22:12 +11:00
Maximilian Bosch 10a453c61b
geogebra: add ma27 as maintainer 2017-02-19 16:51:01 +01:00
Maximilian Bosch 5d62724e27
geogebra: 5-0-328-0 -> 5-0-331-0 2017-02-19 16:44:49 +01:00
Maximilian Bosch d95868e980
geogebra: 5-0-320-0 -> 5-0-328-0 2017-02-14 17:43:58 +01:00
Joachim F 2b961075ae Merge pull request #22231 from Ma27/hotfix/update-geogebra 
geogebra: 5.0.271.0 -> 5-0-320-0
 2017-02-03 01:13:07 +01:00
Peter Hoeg 58a5d0783e speedcrunch: 0.11 -> 0.12.0 
Also:
  - build against qt5 instead of qt4
 2017-02-02 09:13:54 +08:00
Maximilian Bosch eda5bca00a geogebra: 5.0.271.0 -> 5-0-320-0 2017-01-28 17:33:20 +01:00
Michael Raskin 7c5784d1f0 maxima: 5.38.1 -> 5.39.0 2017-01-02 21:53:21 +01:00
Michael Raskin 3a98749bd1 pari: 2.9.0 -> 2.9.1 2016-12-08 16:15:18 +01:00
Michael Raskin fcc5a4d3b8 Merge pull request #20672 from AndersonTorres/pari 
pari/gp: 2.7.6 -> 2.9.0
 2016-11-26 13:34:15 +00:00
Ole Krüger a31c37c759 [mathematica] 10.0.2 -> 11.0.1 2016-11-25 12:13:41 +01:00
AndersonTorres d395439a10 pari/gp: 2.7.6 -> 2.9.0 
Adding gp2c compiler, too.
 2016-11-24 22:44:56 -02:00
Ertugrul Söylemez 9c8f6fb4fb pari-unstable: 2.8.0 -> 2.8.1, "alpha" -> "unstable". 2016-10-27 14:48:03 +02:00
Michael Raskin f9f23084d9 pari_alpha: fix source link 2016-10-27 12:17:16 +02:00
Michael Raskin 28aa92de64 maxima: support building with ECL; optionally support building maxima.fas when building with ECL 2016-10-26 11:06:41 +02:00
Michael Raskin 36804c75e4 singular: Wrap executables instead of symlinking 
This way config scripts can fidn out their own location
 2016-10-26 11:06:40 +02:00
Michael Raskin 2bed05d8e1 singular: add an option to install as libsingular 2016-10-26 11:06:40 +02:00
Michael Raskin 8e9ad9bfdc pari_alpha: use perl to generate function descriptions 2016-10-26 11:06:40 +02:00
Michael Raskin 5af1b7ad02 singular: 3-1-2 -> 3-1-7 2016-10-26 11:06:39 +02:00
Michael Raskin 93bea1ecb0 R: 3.2.3 -> 3.2.4 2016-10-26 11:06:37 +02:00
Michael Raskin 5f418b75d6 nauty: init at 26r7 2016-10-26 11:06:36 +02:00
Michael Raskin a67a50895c gfan: init at 0.5 2016-10-26 11:06:36 +02:00
Michael Raskin 71f659d86d pari_alpha: init at 2.8.0.alpha: planning to use for Sage 2016-10-26 11:06:34 +02:00
Michael Raskin 411d5742ca symmetrica: init at 2.0 2016-10-26 11:06:33 +02:00
Michael Raskin c450d7b0a8 ratpoints: init at 2.1.3 2016-10-26 11:06:33 +02:00
Kirill Boltaev 3e646865f4 treewide: use ocaml.version (#19192) 2016-10-05 09:32:30 +02:00
Kirill Boltaev 2bc87d48f1 scilab: mark as broken 2016-09-26 02:36:49 +03:00
Kirill Boltaev 06ecea00e5 glsurf: mark as broken 2016-09-26 02:36:49 +03:00
Vincent Laporte c78c2b98c4 ecm: set meta.platforms to linux only 2016-09-21 19:14:11 +02:00
Ram Kromberg a729d6ee55 calc: remove redundant groff dependency 2016-09-19 01:37:45 +03:00
Nikolay Amiantov 4748709926 Merge commit 'refs/pull/18498/head' of git://github.com/NixOS/nixpkgs 2016-09-13 12:51:34 +03:00
Kirill Boltaev bccd75094f treewide: explicitly specify gtk and related package versions 2016-09-12 18:26:06 +03:00
Chris Martin e417a63e61 scilab: md5->sha256 2016-09-10 13:50:10 -04:00
Joachim F 3d852770db Merge pull request #18164 from moyamo/geogebra 
geogebra: 5.0.265.0 -> 5.0.271.0
 2016-09-03 17:06:54 +02:00
Tuomas Tynkkynen 3364230d56 Disable bunch of non-compiling packages on Darwin 
These ones have a "Last successful build" timestamp in the 2014s or
2015s. Presumably no one will notice if we now stop building them.

softether_4_18              2015-09-20  http://hydra.nixos.org/build/39418483
lensfun                     2014-09-30  http://hydra.nixos.org/build/39394104
net_snmp                    2015-09-20  http://hydra.nixos.org/build/39410553
djview                      2015-08-11  http://hydra.nixos.org/build/39413233
libmusicbrainz2             2015-09-20  http://hydra.nixos.org/build/39410106
fox_1_6                     2014-05-07  http://hydra.nixos.org/build/39410858
libofx                      2015-09-24  http://hydra.nixos.org/build/39423507
yacas                       2014-09-30  http://hydra.nixos.org/build/39393150
iomelt                      2014-09-30  http://hydra.nixos.org/build/39408486
softether                   2015-09-20  http://hydra.nixos.org/build/39425800
mp4v2                       2014-09-30  http://hydra.nixos.org/build/39421899
virtuoso7                   2014-09-21  http://hydra.nixos.org/build/39415206
man_db                      2015-04-23  http://hydra.nixos.org/build/39404236
libdiscid                   2014-09-30  http://hydra.nixos.org/build/39412202
zabbix22.agent              2014-09-21  http://hydra.nixos.org/build/39412149
vidalia                     2015-08-06  http://hydra.nixos.org/build/39411500
libmtp                      2015-09-20  http://hydra.nixos.org/build/39419199
wxGTK29                     2015-09-20  http://hydra.nixos.org/build/39415296
ncmpcpp                     2015-11-06  http://hydra.nixos.org/build/39404455
libtorrent                  2014-09-21  http://hydra.nixos.org/build/39394646
shishi                      2014-03-21  http://hydra.nixos.org/build/39418874
ocaml_3_12_1                2014-09-30  http://hydra.nixos.org/build/39392996
djview4                     2015-08-11  http://hydra.nixos.org/build/39427799
vimNox                      2014-05-23  http://hydra.nixos.org/build/39397012
ttfautohint                 2015-08-06  http://hydra.nixos.org/build/39398330
libraw                      2015-09-24  http://hydra.nixos.org/build/39402271
wxGTK30                     2015-09-20  http://hydra.nixos.org/build/39401871
sbcl_1_2_5                  2015-09-20  http://hydra.nixos.org/build/39426091
prover9                     2014-09-30  http://hydra.nixos.org/build/39406476
rcs                         2015-08-25  http://hydra.nixos.org/build/39392037
gpac                        2015-09-24  http://hydra.nixos.org/build/39399470
virtuoso6                   2014-09-30  http://hydra.nixos.org/build/39398651
xlslib                      2015-09-24  http://hydra.nixos.org/build/39410387
ucommon                     2015-03-27  http://hydra.nixos.org/build/39414040
commoncpp2                  2014-09-30  http://hydra.nixos.org/build/39420117
virtuoso                    2014-09-21  http://hydra.nixos.org/build/39399978
miniHttpd                   2014-09-30  http://hydra.nixos.org/build/39392925
mpack                       2014-09-26  http://hydra.nixos.org/build/39399535
nbd                         2014-09-26  http://hydra.nixos.org/build/39401367
newsbeuter-dev              2014-07-29  http://hydra.nixos.org/build/39406259
gimp_2_8                    2015-09-20  http://hydra.nixos.org/build/39436271
gimp                        2015-09-20  http://hydra.nixos.org/build/39435976
zabbix20.agent              2014-09-30  http://hydra.nixos.org/build/39393242
gst_all_1.gst-plugins-good  2015-09-20  http://hydra.nixos.org/build/39408506
ocaml_4_00_1                2014-09-30  http://hydra.nixos.org/build/39399526
inadyn                      2014-09-30  http://hydra.nixos.org/build/39426389
gst_all_1.gst-plugins-bad   2015-09-20  http://hydra.nixos.org/build/39392970
zabbix.agent                2014-09-30  http://hydra.nixos.org/build/39421412
cmake-2_8                   2015-09-24  http://hydra.nixos.org/build/39399443
liblastfm                   2015-08-06  http://hydra.nixos.org/build/39421812
newsbeuter                  2014-07-29  http://hydra.nixos.org/build/39396605
sdcv                        2014-09-26  http://hydra.nixos.org/build/39412928
 2016-09-01 20:39:33 +03:00
Mohammed Yaseen Mowzer 921682a4d5 geogebra: 5.0.265.0 -> 5.0.271.0 2016-08-31 18:31:56 +02:00
Tuomas Tynkkynen d3dc3d4130 Merge remote-tracking branch 'dezgeg/shuffle-outputs' into staging 
https://github.com/NixOS/nixpkgs/pull/14766
 2016-08-30 12:43:37 +03:00
Tuomas Tynkkynen c3bcb4e1ce treewide: Use explicit 'dev' references to glibc 2016-08-30 03:11:09 +03:00
Vincent Laporte 17af87323d maxima: 5.36.1 -> 5.38.1 2016-08-29 15:52:05 +02:00
Robin Gloster 005a147f92
sage: fix build 
closes #17842
 2016-08-29 12:46:51 +00:00
obadz 57ddc155fc Merge branch 'master' into staging 
Conflicts:
	pkgs/games/scummvm/default.nix
 2016-08-28 12:20:59 +01:00
Gabriel Ebner 497b3cabcc libqalculate, qalculate-gtk: 0.9.8 -> 0.9.9 2016-08-28 10:40:33 +02:00
obadz 3de6e5be50 Merge branch 'master' into staging 
Conflicts:
      pkgs/applications/misc/navit/default.nix
      pkgs/applications/networking/mailreaders/alpine/default.nix
      pkgs/applications/networking/mailreaders/realpine/default.nix
      pkgs/development/compilers/ghc/head.nix
      pkgs/development/libraries/openssl/default.nix
      pkgs/games/liquidwar/default.nix
      pkgs/games/spring/springlobby.nix
      pkgs/os-specific/linux/kernel/perf.nix
      pkgs/servers/sip/freeswitch/default.nix
      pkgs/tools/archivers/cromfs/default.nix
      pkgs/tools/graphics/plotutils/default.nix
 2016-08-27 23:54:54 +01:00
Robin Gloster 13d7e83bf1 perseus: use default gcc 2016-08-24 22:41:41 +00:00
Franz Pletz bd4490e277 Merge branch 'master' into hardened-stdenv 2016-08-13 16:59:55 +02:00
Luca Bruno 27f294f38d Merge pull request #17589 from cmfwyp/sagemath 
sagemath: update mirrors, fix TeX Live dependency
 2016-08-12 21:58:41 +01:00
Robin Gloster b7787d932e Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-08-12 09:46:53 +00:00
Robin Gloster 40d217b90e Merge pull request #17657 from matthewbauer/darwin-misc 
Darwin misc. fixes
 2016-08-11 16:41:34 +00:00
Michael Raskin da4b7afea8 pari: 2.7.5 -> 2.7.6 2016-08-11 17:57:35 +02:00
Matthew Bauer b3cb07e130 lie: only build on linux 
Darwin build fails from conflicts in libSystem:

In file included from altdom.c:1:
In file included from /private/var/folders/7t/4vz31njj37b8y_bg6z3t7tk00000gn/T/nix-build-LiE-2.2.2.drv-0/LiE/lie.h:34:
In file included from /nix/store/9ll4m9yx854hr64fn1w9ra3qimm3pzdk-Libsystem-osx-10.9.5/include/string.h:176:
/nix/store/9ll4m9yx854hr64fn1w9ra3qimm3pzdk-Libsystem-osx-10.9.5/include/strings.h:73:7: error: redefinition of 'index' as different kind of symbol
char    *index(const char *, int) __POSIX_C_DEPRECATED(200112L);
         ^
/private/var/folders/7t/4vz31njj37b8y_bg6z3t7tk00000gn/T/nix-build-LiE-2.2.2.drv-0/LiE/lie.h:6:14: note: previous definition is here
typedef long index;
             ^
1 error generated.
 2016-08-10 21:06:22 -05:00
Matthew Bauer d4b1289592 lie: LiE -> lie 
Attributes need to be lowercase, see https://nixos.org/nixpkgs/manual/#sec-package-naming.
 2016-08-10 21:04:16 -05:00
obadz 8df7571bbc geogebra: don't build on hydra since derivation just unpacks jars 2016-08-10 14:35:14 +01:00
Mohammed Yaseen Mowzer 04f0cb86d0 geogebra: init at 5.0.265.0 
Closes #17400
 2016-08-10 14:32:09 +01:00
cmfwyp 179d992427
sage: fix TeX Live input 
The Sage derivation had texLive, the old TeX Live packaging which
is now marked as broken, as a build input. This replaces it by the
current TeX Live packaging.

However, the build remains broken. One of the problems can be
solved by patching the hashbangs at the beginning of build scripts,
but the build still gets stuck while building ncurses.
 2016-08-07 23:18:47 -04:00
Tuomas Tynkkynen fdde95e096 msieve: Broken on i686 
http://hydra.nixos.org/build/38236222
 2016-08-06 17:06:45 +03:00
Erik Rybakken 37aff96daf ripser: init at 1.0 (#17481) 2016-08-04 10:21:48 +02:00
Robin Gloster 1b979d8384 Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-08-03 13:34:44 +00:00
Tuomas Tynkkynen 21f17d69f6 treewide: Add lots of meta.platforms 
Build-tested on x86_64 Linux & Mac.
 2016-08-02 21:42:43 +03:00
Tuomas Tynkkynen 1bf5ded193 treewide: Lots of meta.hydraPlatforms -> meta.platforms 
In all of these files, there is no meta.platforms but only
meta.hydraPlatforms, which doesn't seem to have any purpose except being
inconsistent.
 2016-08-02 21:17:44 +03:00
Robin Gloster 63c7b4f9a7 Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-07-31 20:51:34 +00:00
Bryan Gardiner ed071594e5
scilab-bin: init at 5.5.2 
A built-from-source Scilab 5 package looks to be a lot more work, and some
dependencies are missing from Nixpkgs, but the binary version with bundled
dependencies works.
 2016-07-27 21:30:12 -07:00
Robin Gloster 203846b9de Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-07-19 10:37:02 +00:00
Ben Darwin a896233396 jags: 3.4.0 -> 4.1.0 (#16804) 
* jags: 3.4.0 -> 4.1.0
* unbreak rjags and dependent packages
 2016-07-18 13:11:18 +02:00
Konstantin Heil c0656fe0c1 LiE: include forgotten file INFO.a by installation 2016-07-14 14:18:57 +02:00
Franz Pletz 26dd9acba5 Merge remote-tracking branch 'origin/master' into hardened-stdenv 2016-07-09 13:21:28 +02:00
Konstantin Heil b92c429799 LiE: init at 2.2.2 2016-06-30 21:04:41 +02:00
Bjørn Forsman bd01fad0ed Captialize meta.description of all packages 
In line with the Nixpkgs manual.

A mechanical change, done with this command:

  find pkgs -name "*.nix" | \
      while read f; do \
          sed -e 's/description\s*=\s*"\([a-z]\)/description = "\u\1/' -i "$f"; \
      done

I manually skipped some:

* Descriptions starting with an abbreviation, a user name or package name
* Frequently generated expressions (haskell-packages.nix)
 2016-06-20 13:55:52 +02:00
Gabriel Ebner 727716cd82 speedcrunch: 0.11-alpha -> 0.11 2016-06-19 18:45:04 +02:00
Gabriel Ebner e5b3b685f4 libqalculate, qalculate-gtk: 0.9.7 -> 0.9.8 2016-06-19 17:33:45 +02:00
mimadrid aa8eba9d95
weka: 3.6.12 -> 3.8.0 
Closes #16055
 2016-06-16 15:47:48 +02:00
Robin Gloster 8031cba2ab Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-06-10 09:27:04 +00:00
Christopher Lübbemeier ac4903284c gmsh: init at 2.12.0 2016-06-09 18:54:26 +02:00
Joachim Fasting e65698db0b Merge pull request #15939 from ChrisJefferson/fix-gap 
gap : 4.4.12 -> 4.8.3
 2016-06-04 01:14:09 +02:00
Chris Jefferson 75f793bbb2 gap : 4.4.12 -> 4.8.3 2016-06-03 19:01:12 +01:00
Tuomas Tynkkynen bac26e08db Fix lots of fetchgit hashes (fallout from #15469) 2016-06-03 17:17:08 +03:00
Robin Gloster 2d382f3d98 Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-05-30 19:39:34 +00:00
Tuomas Tynkkynen 8d473f107c treewide: Make explicit that 'dev' output of readline is used 2016-05-19 10:03:35 +02:00
Tuomas Tynkkynen 47c45e2041 treewide: Make explicit that 'dev' output of gmp is used 2016-05-19 10:00:36 +02:00
Franz Pletz f8d481754c
Merge remote-tracking branch 'origin/master' into hardened-stdenv 2016-05-18 17:10:02 +02:00
Peter Simons 8e462995ba Bring my stdenv.lib.maintainers user name in line with my github nick. 2016-05-16 22:49:55 +02:00
Vladimír Čunát 1dc36904d8 Merge #14920: windows improvements, mainly mingw 2016-05-05 08:30:19 +02:00
taku0 f2bab58b3e lp_solve: change source URL to mirror 2016-05-04 22:17:56 +09:00
taku0 3fa49d5ac4 lp_solve: updated description 2016-05-04 22:03:22 +09:00
taku0 725c85c720 lp_solve: fixed build error due to defining isnan 2016-05-04 19:58:05 +09:00
Robin Gloster c92bca56f8 Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-05-02 22:58:02 +00:00
Nikolay Amiantov ab0a0c004e makeSearchPathOutputs: refactor to makeSearchPathOutput 2016-04-25 13:24:39 +03:00
Vincent Laporte 71e0ce571b csdp: fix build on Darwin 
When the `INSTALL` file is present, `make` claims that the `install`
target is up-to-date.
 2016-04-22 11:53:43 +02:00
Robin Gloster d020caa5b2 Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-04-18 13:49:22 +00:00
Nikolay Amiantov 8b7ebaffeb replace makeSearchPath tree-wise to take care of possible multiple outputs 2016-04-13 22:09:41 +03:00
Robin Gloster 025cedc606 singular.i686-linux: turn off stackprotector hardening 2016-04-03 12:25:05 +00:00
Vladimír Čunát ab15a62c68 Merge branch 'master' into closure-size 
Beware that stdenv doesn't build. It seems something more will be needed
than just resolution of merge conflicts.
 2016-04-01 10:06:01 +02:00
Robin Gloster f60c9df0ba Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-03-28 15:16:29 +00:00
Joachim Fasting 649c2cd027 lp_solve: mark as broken 
See https://hydra.nixos.org/build/32393768/log/raw
 2016-03-19 12:46:22 +01:00
Arseniy Seroka 1fb354d1ab Merge pull request #14008 from bzizou/scotch 
scotch: init at 6.0.4
 2016-03-18 22:50:20 +03:00
Bruno Bzeznik Bruno.Bzeznik@imag.fr 75af59f8eb scotch: init at 6.0.4 2016-03-18 10:54:41 +01:00
Vladimír Čunát 09af15654f Merge master into closure-size 
The kde-5 stuff still didn't merge well.
I hand-fixed what I saw, but there may be more problems.
 2016-03-08 09:58:19 +01:00
Franz Pletz aff1f4ab94 Use general hardening flag toggle lists 
The following parameters are now available:

  * hardeningDisable
    To disable specific hardening flags
  * hardeningEnable
    To enable specific hardening flags

Only the cc-wrapper supports this right now, but these may be reused by
other wrappers, builders or setup hooks.

cc-wrapper supports the following flags:

  * fortify
  * stackprotector
  * pie (disabled by default)
  * pic
  * strictoverflow
  * format
  * relro
  * bindnow
 2016-03-05 18:55:26 +01:00
Robin Gloster 4f0608abdb perseus: disable stackprotector hardening 2016-02-29 12:51:28 +00:00
Robin Gloster 3b4765c9e5 Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-02-28 16:32:57 +00:00
zimbatm 17348dc094 Remove all dots at end of descriptions 
Specially crafted for @JagaJaga

    find pkgs -name "*.nix" -exec \
      sed -e 's|\(description.*\)\.";|\1";|g' -i {} \;
 2016-02-27 17:30:29 +00:00
Robin Gloster 3477e662e6 Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-02-27 00:08:08 +00:00
tg(x) 1fb998f6c6 calc: init at 2.12.5.3 2016-02-24 22:47:55 +01:00
Vladimír Čunát d039c87984 Merge branch 'master' into closure-size 2016-02-14 08:33:51 +01:00
Robin Gloster c572cc5159 qalculate-gtk: turn off format hardening 2016-02-12 16:16:52 +00:00
Robin Gloster 0afc644cfd cbc: turn off format hardening 2016-02-09 01:35:33 +00:00
Robin Gloster 5808bfb977 yacas: no format hardening 2016-02-07 22:51:21 +00:00
Robin Gloster 8c91610cb2 content: remove 
Doesn't build and have been abandoned for years
 2016-01-30 20:31:05 +00:00
Vladimír Čunát 716aac2519 Merge branch 'staging' into closure-size 2016-01-19 09:55:31 +01:00
Mathieu Boespflug 545444cd19 R: add a new enableStrictBarrier package option. 
This option compiles R with --enable-strict-barrier. Doing so is
enables extra memory diagnostics in R that very useful for debugging
memory leak or memory protections issues in extensions to R written in
C, or for any apps embedding R (e.g. Haskell aps embedding R via
HaskellR).
 2016-01-17 11:09:05 +01:00
Vladimír Čunát 4858f3307e R: fix build after splitting gfortran.lib 
The extra flag was causing static libraries to be found (and used)
before dynamic ones. /cc #12085
 2016-01-12 23:57:48 +01:00
Asko Soukka a225a650bf R: fix Darwin build 
Merged manually from https://github.com/NixOS/nixpkgs/pull/10623.
 2016-01-06 22:20:40 +01:00
Michael Raskin 51f8932c8e pari (PARI/GP): 2.7.4 -> 2.7.5 2016-01-01 12:30:17 +03:00
Michel Kuhlmann cebbb18e9e R: 3.2.2 -> 3.2.3 2015-12-11 11:36:30 +01:00
Aristid Breitkreuz 158e4ffd9c mathematica package patchPhase does not like set -e 2015-11-30 21:08:30 +01:00
Nikolay Amiantov 5ee5b5ba82 R: add curl for https support 2015-11-25 11:39:28 +01:00
Joachim Fasting 6d4ff90207 gap: reimplement using mkDerivation 2015-11-24 14:45:15 +01:00
Joachim Fasting 022bbe1c0c singular: reimplement using mkDerivation 2015-11-24 14:45:15 +01:00
Karn Kallio 87b75c33ce R: advance to version 3.2.2. 
A test failing without recommended packages has been patched.
 2015-10-02 22:15:14 +02:00
Peter Simons ccd3e52b60 Merge pull request #9917 from FlorentBecker/sage 
Update sage to 6.8
 2015-09-30 17:28:36 +02:00
Vladimír Čunát 76ef7a93e3 Merge: xlibs and x11 attribute cleanup 
Frequently using multiple *almost* identical attributes is bad.
 2015-09-23 10:42:34 +02:00
Florent Becker b860b106c5 sage: 6.1.1 -> 6.8 2015-09-22 09:01:33 +00:00
Erik Rybakken 64c1a9a2e2 perseus: init at 4-beta 2015-09-19 00:56:24 +02:00
William A. Kennington III 773b4deb7c Merge commit 'a6f6c0e' into master.upstream 
This is a partial merge of staging where we have up to date binaries for
all packages.
 2015-09-15 12:16:49 -07:00
Vladimír Čunát 88c9f8b574 xlibs: replace occurrences by xorg 
This seems to have been confusing people, using both xlibs and xorg, etc.
- Avoided renaming local (and different) xlibs binding in gcc*.
- Fixed cases where both xorg and xlibs were used.
Hopefully everything still works as before.
 2015-09-15 12:54:34 +02:00
Vladimír Čunát 21e3ff658a x11: replace its usage by xlibsWrapper directly 
Scilab note: the parameters already had pointed to nonexistent dirs
before this set of refactoring. But that config wasn't even used by
default.
 2015-09-15 12:08:24 +02:00
Mathnerd314 eb7404d97a all-packages: Use callPackage where possible 2015-09-14 22:27:19 -06:00
Russell O'Connor 772ec9cae3 csdp: init at 6.1.1 2015-09-10 11:50:18 -04:00
Vladimír Čunát 8f33b8cc93 mass rewrite of find parameters to cross-platform style 
Fixes #9044, close #9667. Thanks to @taku0 for suggesting this solution.
Now we have no modes starting with `/` or `+`.

Rewrite the `-perm` parameters of find:
 - completely safe: rewrite `/0100` and `+100` to `-0100`,
 - slightly semantics-changing: rewrite `+111` to `-0100`.
I cross-verified the `find` manual pages for Linux, Darwin, FreeBSD.
 2015-09-06 10:26:30 +02:00
Eelco Dolstra 8fc039188e Mark some packages with undownloadable source as broken 2015-09-01 12:00:04 +02:00
Gabriel Ebner 6b42cd852a qalculate-gtk: init at 0.9.7 2015-08-31 19:20:29 +02:00
Eelco Dolstra f423ba3863 cbc: Enable on Darwin 2015-08-19 11:53:10 +02:00
Eelco Dolstra 80c137c7a2 Add cbc, a mixed ILP solver 2015-08-12 18:39:28 +02:00
Arseniy Seroka e9b5deb973 Merge pull request #8964 from vbgl/ecm 
ecm: 6.2.3 -> 6.4.4
 2015-07-26 20:09:10 +03:00
Sergey Mironov dcdd7a37f6 lp_solve: add the expression 2015-07-23 20:42:35 +02:00
Vincent Laporte 08750f988a ecm: 6.2.3 -> 6.4.4 2015-07-23 19:22:03 +02:00
William Casarin 8ead9cf0c5 caffe: init at rev 77d66dfc 
Initial version of the Caffe deep learning framework from Berkeley
 2015-07-08 10:07:10 -07:00
Michael Raskin d7dae65b5c pari: update 2.7.3 -> 2.7.4 2015-07-05 00:32:53 +03:00
Vincent Laporte 5beebaca58 fix glsurf 2015-06-25 08:55:29 +02:00
Michel Kuhlmann 46d46fd05a R: update to 3.2.1 2015-06-18 14:00:29 +02:00
Thomas Tuegel 4fb98dd6a7 jags: build with openblas 2015-06-12 07:56:04 -05:00
Thomas Tuegel e729a88474 R: build with openblas 
Fixes #6393.
 2015-06-04 17:42:04 -05:00
Tobias Geerinckx-Rice 158e1cfdd0 Don't use "with licenses;" for single licences 
And don't use square brackets on such lines.
 2015-05-28 19:20:29 +02:00
Tobias Geerinckx-Rice b2d7f4b1ba Use common licence attributes from lib/licenses.nix 
Many (less easily automatically converted) old-style strings
remain.

Where there was any possible ambiguity about the exact version or
variant intended, nothing was changed. IANAL, nor a search robot.

Use `with stdenv.lib` wherever it makes sense.
 2015-05-27 22:00:06 +02:00
Peter Simons c1e62e9e8b maxima: update to version 5.36.1 2015-05-13 12:17:16 +02:00
Peter Simons 645b1cea6e wxmaxima: update to 15.04.0 2015-05-13 12:17:01 +02:00