From 9a22c8c697af31c9f0686b326ed8ae59b5d36768 Mon Sep 17 00:00:00 2001
From: Bruno Bzeznik <Bruno.Bzeznik@imag.fr>
Date: Tue, 16 Jul 2019 10:12:15 +0200
Subject: [PATCH] est-sfs: init at 2.03

---
 .../science/biology/est-sfs/default.nix       | 28 +++++++++++++++++++
 pkgs/top-level/all-packages.nix               |  2 ++
 2 files changed, 30 insertions(+)
 create mode 100644 pkgs/applications/science/biology/est-sfs/default.nix

diff --git a/pkgs/applications/science/biology/est-sfs/default.nix b/pkgs/applications/science/biology/est-sfs/default.nix
new file mode 100644
index 000000000000..dcc725233551
--- /dev/null
+++ b/pkgs/applications/science/biology/est-sfs/default.nix
@@ -0,0 +1,28 @@
+{ stdenv, fetchurl, gsl }:
+
+stdenv.mkDerivation rec {
+  pname = "est-sfs";
+  version = "2.03";
+
+  src = fetchurl {
+    url = "mirror://sourceforge/est-usfs/${pname}-release-${version}.tar.gz";
+    sha256 = "1hvamrgagz0xi89w8qafyd9mjrdpyika8zm22drddnjkp4sdj65n";
+  };
+
+  buildInputs = [ gsl ];
+
+  installPhase = ''
+    mkdir -p $out/bin
+    mkdir -p $out/share/doc/${pname}
+    cp est-sfs $out/bin
+    cp est-sfs-documentation.pdf $out/share/doc/${pname}
+  '';
+
+  meta = with stdenv.lib; {
+    homepage = https://sourceforge.net/projects/est-usfs;
+    description = "Estimate the unfolded site frequency spectrum and ancestral states";
+    license = licenses.gpl3;
+    maintainers = [ maintainers.bzizou ];
+    platforms = platforms.all;
+  };
+}
diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix
index 1a9a1c54b3a5..a0cd2689aba4 100644
--- a/pkgs/top-level/all-packages.nix
+++ b/pkgs/top-level/all-packages.nix
@@ -21880,6 +21880,8 @@ in
 
   emboss = callPackage ../applications/science/biology/emboss { };
 
+  est-sfs = callPackage ../applications/science/biology/est-sfs { };
+
   ezminc = callPackage ../applications/science/biology/EZminc { };
 
   hisat2 = callPackage ../applications/science/biology/hisat2 { };