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Merge pull request #58369 from bzizou/clustalo

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clustal-omega: init at 1.2.4
This commit is contained in:
Robin Gloster 2019-05-18 10:16:43 +00:00 committed by GitHub
parent 6e546e0326 6858d0fd62
commit 43aa2e30c3
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2 changed files with 34 additions and 0 deletions
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32
pkgs/applications/science/biology/clustal-omega/default.nix Normal file
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@ -0,0 +1,32 @@
{ stdenv, fetchurl, argtable }:
stdenv.mkDerivation rec {
version = "1.2.4";
name = "clustal-omega-${version}";
src = fetchurl {
url = "http://www.clustal.org/omega/${name}.tar.gz";
sha256 = "1vm30mzncwdv881vrcwg11vzvrsmwy4wg80j5i0lcfk6dlld50w6";
};
buildInputs = [ argtable ];
preConfigure = ''
for f in configure \
src/clustal-omega-config.h \
src/clustal-omega-config.h \
src/config.h.in \
src/mymain.c
do
sed -i -re 's/argtable2/argtable3/g' $f
done
'';
meta = with stdenv.lib; {
description = "General purpose multiple sequence alignment program for protein and DNA/RNA";
homepage = http://www.clustal.org/omega/;
license = licenses.gpl2;
maintainers = [ maintainers.bzizou ];
platforms = platforms.unix;
};
}

2
pkgs/top-level/all-packages.nix
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@ -22129,6 +22129,8 @@ in
cmtk = callPackage ../applications/science/biology/cmtk { };
clustal-omega = callPackage ../applications/science/biology/clustal-omega { };
conglomerate = callPackage ../applications/science/biology/conglomerate { };
dcm2niix = callPackage ../applications/science/biology/dcm2niix { };