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nixpkgs/pkgs/applications/science/biology/minc-tools/default.nix
Profpatsch 4a7f99d55d treewide: with stdenv.lib; in meta -> with lib;
Part of: https://github.com/NixOS/nixpkgs/issues/108938

meta = with stdenv.lib;

is a widely used pattern. We want to slowly remove
the `stdenv.lib` indirection and encourage people
to use `lib` directly. Thus let’s start with the meta
field.

This used a rewriting script to mostly automatically
replace all occurances of this pattern, and add the
`lib` argument to the package header if it doesn’t
exist yet.

The script in its current form is available at
https://cs.tvl.fyi/depot@2f807d7f141068d2d60676a89213eaa5353ca6e0/-/blob/users/Profpatsch/nixpkgs-rewriter/default.nix
2021-01-11 10:38:22 +01:00

37 lines
1.1 KiB
Nix

{ lib, stdenv, fetchFromGitHub, cmake, makeWrapper, flex, bison, perl, TextFormat,
libminc, libjpeg, nifticlib, zlib }:
stdenv.mkDerivation rec {
pname = "minc-tools";
version = "unstable-2020-07-25";
src = fetchFromGitHub {
owner = "BIC-MNI";
repo = pname;
rev = "fb0a68a07d281e4e099c5d54df29925240de14c1";
sha256 = "0zcv2sdj3k6k0xjqdq8j5bxq8smm48dzai90vwsmz8znmbbm6kvw";
};
nativeBuildInputs = [ cmake flex bison makeWrapper ];
buildInputs = [ libminc libjpeg nifticlib zlib ];
propagatedBuildInputs = [ perl TextFormat ];
cmakeFlags = [ "-DLIBMINC_DIR=${libminc}/lib/cmake"
"-DZNZ_INCLUDE_DIR=${nifticlib}/include/nifti"
"-DNIFTI_INCLUDE_DIR=${nifticlib}/include/nifti" ];
postFixup = ''
for prog in minccomplete minchistory mincpik; do
wrapProgram $out/bin/$prog --prefix PERL5LIB : $PERL5LIB
done
'';
meta = with lib; {
homepage = "https://github.com/BIC-MNI/minc-tools";
description = "Command-line utilities for working with MINC files";
maintainers = with maintainers; [ bcdarwin ];
platforms = platforms.unix;
license = licenses.free;
};
}