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nixpkgs/pkgs/applications/science/biology/aragorn/default.nix
Profpatsch 4a7f99d55d treewide: with stdenv.lib; in meta -> with lib;
Part of: https://github.com/NixOS/nixpkgs/issues/108938

meta = with stdenv.lib;

is a widely used pattern. We want to slowly remove
the `stdenv.lib` indirection and encourage people
to use `lib` directly. Thus let’s start with the meta
field.

This used a rewriting script to mostly automatically
replace all occurances of this pattern, and add the
`lib` argument to the package header if it doesn’t
exist yet.

The script in its current form is available at
https://cs.tvl.fyi/depot@2f807d7f141068d2d60676a89213eaa5353ca6e0/-/blob/users/Profpatsch/nixpkgs-rewriter/default.nix
2021-01-11 10:38:22 +01:00

29 lines
774 B
Nix

{ lib, stdenv, fetchurl }:
stdenv.mkDerivation rec {
version = "1.2.38";
pname = "aragorn";
src = fetchurl {
url = "http://mbio-serv2.mbioekol.lu.se/ARAGORN/Downloads/${pname}${version}.tgz";
sha256 = "09i1rg716smlbnixfm7q1ml2mfpaa2fpn3hwjg625ysmfwwy712b";
};
buildPhase = ''
$CC -O3 -ffast-math -finline-functions -o aragorn aragorn${version}.c
'';
installPhase = ''
mkdir -p $out/bin && cp aragorn $out/bin
mkdir -p $out/man/1 && cp aragorn.1 $out/man/1
'';
meta = with lib; {
description = "Detects tRNA, mtRNA, and tmRNA genes in nucleotide sequences";
homepage = "http://mbio-serv2.mbioekol.lu.se/ARAGORN/";
license = licenses.gpl2;
maintainers = [ maintainers.bzizou ];
platforms = platforms.unix;
};
}