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nixpkgs/pkgs/development/python-modules/rpy2/rpy2-3.x-r-libs-site.patch
Masanori Ogino 0d2f29d617 pythonPackages.rpy2: 3.2.6 -> 3.3.6, fix test etc.
- This newer version is compatible with panda 1.0 without any patch.
- rPackages.lazyload is required to run tests.
- The official website is moved to GitHub Pages.

Signed-off-by: Masanori Ogino <167209+omasanori@users.noreply.github.com>
2020-11-23 21:55:28 -08:00

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diff --git a/rpy2/rinterface_lib/embedded.py b/rpy2/rinterface_lib/embedded.py
index 1f4babbf..322363c5 100644
--- a/rpy2/rinterface_lib/embedded.py
+++ b/rpy2/rinterface_lib/embedded.py
@@ -118,6 +118,16 @@ def _initr(
if openrlib.R_HOME is None:
raise ValueError('openrlib.R_HOME cannot be None.')
os.environ['R_HOME'] = openrlib.R_HOME
+
+ # path to libraries
+ existing = os.environ.get('R_LIBS_SITE')
+ if existing is not None:
+ prefix = existing + ':'
+ else:
+ prefix = ''
+ additional = '@NIX_R_LIBS_SITE@'
+ os.environ['R_LIBS_SITE'] = prefix + additional
+
options_c = [ffi.new('char[]', o.encode('ASCII')) for o in _options]
n_options = len(options_c)
n_options_c = ffi.cast('int', n_options)