Bobby Rong 3b468e68b7 Merge pull request #173017 from trofi/workaround-fno-common-for-freebayes ... freebayes: add -fcommon workaround		2022-05-22 13:39:14 +08:00
..
angsd	angsd: init at 0.937	2022-03-04 09:17:35 -06:00
ants
aragorn
bayescan	bayescan: fix the build	2022-05-13 12:00:08 +02:00
bcftools	bcftools: 1.14 -> 1.15	2022-02-25 11:12:05 -08:00
bedops
bedtools
bftools
blast	blast: 2.12.0 -> 2.13.0	2022-04-29 09:39:10 -05:00
bowtie	bowtie: fix build on case insensitive file systems	2022-05-11 03:20:03 -05:00
bowtie2
bppsuite
bwa	bwa: pull upstream fix for -fno-common tollchains	2022-05-08 08:56:43 +01:00
cd-hit
clustal-omega	treewide: add meta.mainProgram to many packages	2022-04-14 10:24:01 -07:00
cmtk	cmtk: add -std=c++11 to fix build on gcc11	2022-04-15 11:15:30 -05:00
conglomerate
dcm2niix	dcm2niix: support usage of suggested Cloudflare zlib	2022-04-18 15:00:45 -04:00
deeptools
delly
diamond
ecopcr
eggnog-mapper	eggnog-mapper: 1.0.3 -> 2.1.7	2022-03-18 10:26:47 -05:00
emboss
est-sfs
exonerate
EZminc	ezminc: mark broken	2022-05-17 10:24:07 -07:00
fastp
febio-studio
flywheel-cli	flywheel-cli: init at 16.2.0	2022-03-28 15:54:39 -04:00
freebayes	freebayes: add -fcommon workaround	2022-05-14 13:19:17 +01:00
genmap
hisat2
hmmer
igv
inormalize
itsx
iv
kallisto
kent
kssd	treewide: move autoconf, automake to nativeBuildInputs	2022-03-30 20:17:24 -05:00
last	last: 1260 -> 1268	2022-03-02 13:35:56 +11:00
MACS2
macse
manta
megahit	Static build for megahit	2022-05-04 02:13:31 +02:00
meme-suite
messer-slim
migrate
minc-tools
minc-widgets
minia
minimap2	minimap2: enable aarch64 builds (#161169)	2022-03-04 12:27:29 +01:00
mni_autoreg
mosdepth
mrbayes
mrtrix
muscle
N3
neuron	neuron-mpi: remove appendToName to have a consistent package name for repology	2022-02-28 12:46:15 +01:00
niftyreg
niftyseg
obitools
octopus
paml
picard-tools	treewide: add meta.mainProgram to many packages	2022-04-14 10:24:01 -07:00
platypus
plink-ng
poretools
prodigal
quast	treewide: remove nativeBuildInputs that are in stdenv	2022-04-16 21:46:46 +03:00
raxml	raxml-mpi: remove appendToName to have a consistent package name for repology	2022-02-28 12:46:15 +01:00
repseek
sambamba
samblaster
samtools	Static build for samtools	2022-05-04 02:16:17 +02:00
seaview
snpeff
somatic-sniper
sortmerna
spades
stacks
star
strelka
subread
sumatools
svaba
tebreak	treewide: remove nativeBuildInputs that are in stdenv	2022-04-16 21:46:46 +03:00
trimal
truvari
varscan
vcftools
whisper
xenomapper