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nixpkgs/pkgs/applications/science/biology/bowtie2/default.nix
R. RyanTM 893abe12e8 bowtie2: 2.3.4.3 -> 2.3.5 (#58014)
Semi-automatic update generated by
https://github.com/ryantm/nixpkgs-update tools. This update was made
based on information from
https://repology.org/metapackage/bowtie2/versions
2019-03-31 00:37:38 +01:00

28 lines
750 B
Nix

{ stdenv, fetchFromGitHub, zlib, tbb, python, perl }:
stdenv.mkDerivation rec {
pname = "bowtie2";
version = "2.3.5";
name = "${pname}-${version}";
src = fetchFromGitHub {
owner = "BenLangmead";
repo = pname;
rev = "v${version}";
sha256 = "12v240wnbc541hl4z2fiymxd3bd6czazs13fjkygldflg48w45m0";
};
buildInputs = [ zlib tbb python perl ];
installFlags = [ "prefix=$(out)" ];
meta = with stdenv.lib; {
description = "An ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences";
license = licenses.gpl3;
homepage = http://bowtie-bio.sf.net/bowtie2;
maintainers = with maintainers; [ rybern ];
platforms = platforms.all;
broken = stdenv.isAarch64;
};
}