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nixpkgs/pkgs/applications/science/biology/EZminc/default.nix

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Nix

{ lib, stdenv, fetchFromGitHub, cmake, pkg-config, libminc, bicpl, itk, fftwFloat, gsl }:
stdenv.mkDerivation rec {
pname = "EZminc";
version = "unstable-2019-03-12";
src = fetchFromGitHub {
owner = "BIC-MNI";
repo = pname;
rev = "5e3333ee356f914d34d66d33ea8df809c7f7fa51";
sha256 = "0wy8cppf5xpgfqvgb3mqs1cjh81n6qzkk6zxv29wvng8nar9wsy4";
};
nativeBuildInputs = [ cmake pkg-config ];
buildInputs = [ itk libminc bicpl fftwFloat gsl ];
cmakeFlags = [ "-DLIBMINC_DIR=${libminc}/lib/cmake"
"-DEZMINC_BUILD_TOOLS=TRUE"
"-DEZMINC_BUILD_MRFSEG=TRUE"
"-DEZMINC_BUILD_DD=TRUE" ];
meta = with lib; {
homepage = "https://github.com/BIC-MNI/${pname}";
description = "Collection of Perl and shell scripts for processing MINC files";
maintainers = with maintainers; [ bcdarwin ];
platforms = platforms.unix;
license = licenses.free;
broken = true; # ITK5 compatibility issue (https://github.com/BIC-MNI/EZminc/issues/15)
};
}