forked from mirrors/nixpkgs
67 lines
2 KiB
Nix
67 lines
2 KiB
Nix
{ stdenv, fetchPypi, fetchpatch, python, buildPythonPackage, mpi, openssh }:
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buildPythonPackage rec {
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pname = "mpi4py";
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version = "3.0.0";
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src = fetchPypi {
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inherit pname version;
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sha256 = "1mzgd26dfv4vwbci8gq77ss9f0x26i9aqzq9b9vs9ndxhlnv0mxl";
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};
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passthru = {
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inherit mpi;
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};
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patches = [
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(fetchpatch {
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# Disable tests failing with 3.1.x and MPI_THREAD_MULTIPLE (upstream patch)
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url = "https://bitbucket.org/mpi4py/mpi4py/commits/c2b6b7e642a182f9b00a2b8e9db363214470548a/raw";
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sha256 = "0n6bz3kj4vcqb6q7d0mlj5vl6apn7i2bvfc9mpg59vh3wy47119q";
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})
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(fetchpatch {
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# Open MPI: Workaround removal of MPI_{LB|UB} (upstream patch)
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url = "https://bitbucket.org/mpi4py/mpi4py/commits/39ca784226460f9e519507269ebb29635dc8bd90/raw";
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sha256 = "02kxikdlsrlq8yr5hca42536mxbrq4k4j8nqv7p1p2r0q21a919q";
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})
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];
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postPatch = ''
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substituteInPlace test/test_spawn.py --replace \
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"unittest.skipMPI('openmpi(<3.0.0)')" \
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"unittest.skipMPI('openmpi')"
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'';
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configurePhase = "";
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installPhase = ''
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mkdir -p "$out/lib/${python.libPrefix}/site-packages"
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export PYTHONPATH="$out/lib/${python.libPrefix}/site-packages:$PYTHONPATH"
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${python}/bin/${python.executable} setup.py install \
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--install-lib=$out/lib/${python.libPrefix}/site-packages \
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--prefix="$out"
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# --install-lib:
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# sometimes packages specify where files should be installed outside the usual
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# python lib prefix, we override that back so all infrastructure (setup hooks)
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# work as expected
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# Needed to run the tests reliably. See:
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# https://bitbucket.org/mpi4py/mpi4py/issues/87/multiple-test-errors-with-openmpi-30
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export OMPI_MCA_rmaps_base_oversubscribe=yes
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'';
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setupPyBuildFlags = ["--mpicc=${mpi}/bin/mpicc"];
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nativeBuildInputs = [ mpi openssh ];
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meta = {
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description =
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"Python bindings for the Message Passing Interface standard";
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homepage = http://code.google.com/p/mpi4py/;
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license = stdenv.lib.licenses.bsd3;
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};
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}
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