.. |
ants
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treewide: stdenv.lib -> lib
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2021-01-16 17:58:11 +07:00 |
aragorn
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treewide: with stdenv.lib; in meta -> with lib;
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2021-01-11 10:38:22 +01:00 |
bayescan
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treewide: stdenv.lib -> lib
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2021-01-16 17:58:11 +07:00 |
bcftools
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bcftools: 1.11 -> 1.13
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2021-07-10 10:15:10 +00:00 |
bedops
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bedops: 2.4.39 -> 2.4.40
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2021-07-23 01:02:40 +00:00 |
bedtools
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lzma: deprecate alias
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2021-04-04 19:49:52 +02:00 |
bftools
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treewide: with stdenv.lib; in meta -> with lib;
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2021-01-11 10:38:22 +01:00 |
blast
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blast: 2.10.0 -> 2.11.0
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2021-02-06 19:20:56 +00:00 |
bowtie
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treewide: with stdenv.lib; in meta -> with lib;
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2021-01-11 10:38:22 +01:00 |
bowtie2
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bowtie2: 2.4.3 -> 2.4.4
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2021-05-26 23:43:08 -07:00 |
bppsuite
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bppsuite: init at 2.4.1
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2020-05-25 21:13:02 -04:00 |
bwa
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treewide: with stdenv.lib; in meta -> with lib;
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2021-01-11 10:38:22 +01:00 |
cd-hit
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perlPackages.ImageMagick: rename from perlPackages.PerlMagick
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2021-08-02 20:05:00 +03:00 |
clustal-omega
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treewide: with stdenv.lib; in meta -> with lib;
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2021-01-11 10:38:22 +01:00 |
cmtk
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treewide: stdenv.lib -> lib
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2021-01-16 17:58:11 +07:00 |
conglomerate
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treewide: stdenv.lib -> lib
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2021-01-16 17:58:11 +07:00 |
dcm2niix
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dcm2niix: 1.0.20201102 -> 1.0.20210317
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2021-05-02 11:10:40 +00:00 |
deeptools
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deeptools: Fix tests
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2020-11-25 21:36:37 +01:00 |
delly
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lzma: deprecate alias
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2021-04-04 19:49:52 +02:00 |
diamond
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treewide: with stdenv.lib; in meta -> with lib;
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2021-01-11 10:38:22 +01:00 |
ecopcr
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ecopcr: use spaces for indentation
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2021-01-20 10:53:10 +10:00 |
eggnog-mapper
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treewide: makeWrapper buildInputs to nativeBuildInputs
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2021-02-19 20:09:16 +07:00 |
emboss
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treewide: stdenv.lib -> lib
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2021-01-16 17:58:11 +07:00 |
est-sfs
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est-sfs: fix darwin build
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2021-05-15 12:10:05 +02:00 |
exonerate
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treewide: pkgs.pkgconfig -> pkgs.pkg-config, move pkgconfig to alias.nix
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2021-01-19 01:16:25 -08:00 |
EZminc
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treewide: pkgs.pkgconfig -> pkgs.pkg-config, move pkgconfig to alias.nix
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2021-01-19 01:16:25 -08:00 |
fastp
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treewide: with stdenv.lib; in meta -> with lib;
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2021-01-11 10:38:22 +01:00 |
freebayes
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lzma: deprecate alias
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2021-04-04 19:49:52 +02:00 |
hisat2
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treewide: with stdenv.lib; in meta -> with lib;
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2021-01-11 10:38:22 +01:00 |
hmmer
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treewide: with stdenv.lib; in meta -> with lib;
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2021-01-11 10:38:22 +01:00 |
igv
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treewide: with stdenv.lib; in meta -> with lib;
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2021-01-11 10:38:22 +01:00 |
inormalize
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treewide: with stdenv.lib; in meta -> with lib;
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2021-01-11 10:38:22 +01:00 |
itsx
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treewide: with stdenv.lib; in meta -> with lib;
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2021-01-11 10:38:22 +01:00 |
iv
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treewide: stdenv.lib -> lib
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2021-01-16 17:58:11 +07:00 |
kallisto
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treewide: with stdenv.lib; in meta -> with lib;
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2021-01-11 10:38:22 +01:00 |
kent
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lzma: deprecate alias
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2021-04-04 19:49:52 +02:00 |
kssd
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treewide: with stdenv.lib; in meta -> with lib;
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2021-01-11 10:38:22 +01:00 |
last
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last: 1178 -> 1179
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2021-02-21 21:24:17 +00:00 |
lumpy
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treewide: with stdenv.lib; in meta -> with lib;
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2021-01-11 10:38:22 +01:00 |
MACS2
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macs2: init at 2.2.7.1
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2021-04-14 10:17:53 -04:00 |
macse
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treewide: convert phases that contain ":" to dont* = true (#130500)
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2021-07-18 23:42:48 +02:00 |
manta
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treewide: with stdenv.lib; in meta -> with lib;
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2021-01-11 10:38:22 +01:00 |
megahit
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treewide: with stdenv.lib; in meta -> with lib;
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2021-01-11 10:38:22 +01:00 |
meme-suite
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meme-suite: init at 5.1.1 (#118603)
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2021-04-05 22:43:27 +02:00 |
messer-slim
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messer-slim: 3.2.1 -> 3.6
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2021-03-04 18:40:37 +00:00 |
migrate
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treewide: fix double quoted strings in meta.description
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2021-01-24 19:56:59 +07:00 |
minc-tools
|
treewide: with stdenv.lib; in meta -> with lib;
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2021-01-11 10:38:22 +01:00 |
minc-widgets
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treewide: stdenv.lib -> lib
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2021-01-16 17:58:11 +07:00 |
minia
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treewide: with stdenv.lib; in meta -> with lib;
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2021-01-11 10:38:22 +01:00 |
minimap2
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treewide: editorconfig fixes
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2021-01-20 09:11:11 +10:00 |
mni_autoreg
|
treewide: with stdenv.lib; in meta -> with lib;
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2021-01-11 10:38:22 +01:00 |
mosdepth
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mosdepth: 0.3.1 -> 0.3.2
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2021-07-27 09:52:22 +10:00 |
mrbayes
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mrbayes: 3.2.7 -> 3.2.7a
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2021-07-27 14:30:23 +02:00 |
mrtrix
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mrtrix: 3.0.0 -> 3.0.2
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2020-09-30 22:13:18 -04:00 |
muscle
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treewide: stdenv.lib -> lib
|
2021-01-16 17:58:11 +07:00 |
N3
|
treewide: with stdenv.lib; in meta -> with lib;
|
2021-01-11 10:38:22 +01:00 |
ncbi-tools
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treewide: fix double quoted strings in meta.description
|
2021-01-24 19:56:59 +07:00 |
neuron
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mpi: use mpi attribute consistently as the default MPI implementations
|
2021-01-23 12:15:13 +01:00 |
niftyreg
|
treewide: with stdenv.lib; in meta -> with lib;
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2021-01-11 10:38:22 +01:00 |
niftyseg
|
treewide: with stdenv.lib; in meta -> with lib;
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2021-01-11 10:38:22 +01:00 |
obitools
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treewide: remove stdenv where not needed
|
2021-01-25 18:31:47 +01:00 |
octopus
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octopus: 0.7.3 -> 0.7.4
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2021-05-11 08:46:00 +10:00 |
paml
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treewide: fix double quoted strings in meta.description
|
2021-01-24 19:56:59 +07:00 |
picard-tools
|
picard-tools: 2.25.0 -> 2.25.1
|
2021-03-26 03:16:44 +00:00 |
platypus
|
treewide: makeWrapper buildInputs to nativeBuildInputs
|
2021-02-19 20:09:16 +07:00 |
plink-ng
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treewide: stdenv.lib -> lib
|
2021-01-16 17:58:11 +07:00 |
poretools
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treewide: remove stdenv where not needed
|
2021-01-25 18:31:47 +01:00 |
prodigal
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treewide: add targetPrefix to hardcoded references to CC=cc
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2021-02-20 01:01:46 +07:00 |
quast
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treewide: stdenv.lib -> lib
|
2021-01-16 17:58:11 +07:00 |
raxml
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mpi: use mpi attribute consistently as the default MPI implementations
|
2021-01-23 12:15:13 +01:00 |
sambamba
|
sambamba: fix darwin build
|
2021-05-22 20:56:09 +02:00 |
samblaster
|
samblaster: fix darwin build
|
2021-05-18 13:41:51 +02:00 |
samtools
|
treewide: stdenv.lib -> lib
|
2021-01-16 17:58:11 +07:00 |
seaview
|
treewide: with stdenv.lib; in meta -> with lib;
|
2021-01-11 10:38:22 +01:00 |
snpeff
|
treewide: unzip buildInputs to nativeBuildInputs (#112302)
|
2021-02-20 16:01:53 -05:00 |
somatic-sniper
|
treewide: with stdenv.lib; in meta -> with lib;
|
2021-01-11 10:38:22 +01:00 |
sortmerna
|
sortmerna: mark broken on darwin
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2021-01-26 12:55:33 -05:00 |
spades
|
SPAdes: 3.15.1 -> 3.15.2 + fix license and platform
|
2021-03-23 10:51:01 +01:00 |
stacks
|
stacks: 2.53 -> 2.55
|
2021-03-09 17:19:55 +00:00 |
star
|
star: 2.7.7a -> 2.7.8a
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2021-02-23 10:38:00 +00:00 |
strelka
|
treewide: with stdenv.lib; in meta -> with lib;
|
2021-01-11 10:38:22 +01:00 |
sumatools
|
treewide: with stdenv.lib; in meta -> with lib;
|
2021-01-11 10:38:22 +01:00 |
svaba
|
lzma: deprecate alias
|
2021-04-04 19:49:52 +02:00 |
tebreak
|
treewide: remove stdenv where not needed
|
2021-01-25 18:31:47 +01:00 |
trimal
|
treewide: with stdenv.lib; in meta -> with lib;
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2021-01-11 10:38:22 +01:00 |
truvari
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truvari: 2.0.2 -> 2.1.1 (#126839)
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2021-06-15 22:14:20 +02:00 |
varscan
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treewide: makeWrapper buildInputs to nativeBuildInputs
|
2021-02-19 20:09:16 +07:00 |
vcftools
|
treewide: pkgs.pkgconfig -> pkgs.pkg-config, move pkgconfig to alias.nix
|
2021-01-19 01:16:25 -08:00 |
whisper
|
treewide: with stdenv.lib; in meta -> with lib;
|
2021-01-11 10:38:22 +01:00 |
xenomapper
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