Bobby Rong 4fdcad0d6b Merge pull request #149379 from r-ryantm/auto-update/minimap2 ... minimap2: 2.22 -> 2.23		2021-12-27 18:05:04 +08:00
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ants
aragorn
bayescan
bcftools
bedops
bedtools
bftools
blast
bowtie
bowtie2
bppsuite
bwa
cd-hit
clustal-omega
cmtk
conglomerate
dcm2niix
deeptools
delly	delly: 0.8.7 -> 0.9.1	2021-11-25 21:19:48 +11:00
diamond	diamond: switch to fetchFromGitHub	2021-12-23 19:11:17 +01:00
ecopcr
eggnog-mapper
emboss
est-sfs
exonerate
EZminc
fastp	fastp: 0.23.1 -> 0.23.2	2021-12-02 08:03:17 +11:00
freebayes
genmap	genmap: init 1.3.0	2021-12-04 06:51:16 +11:00
hisat2
hmmer	hmmer: restrict platforms to x86_64	2021-11-20 19:17:57 +00:00
igv
inormalize
itsx
iv
kallisto
kent
kssd	kssd: switch to fetchFromGitHub	2021-12-23 19:11:17 +01:00
last
lumpy
MACS2
macse
manta
megahit
meme-suite
messer-slim	messer-slim: switch to fetchFromGitHub	2021-12-23 19:11:17 +01:00
migrate
minc-tools
minc-widgets
minia
minimap2	minimap2: 2.22 -> 2.23	2021-12-07 15:04:36 +00:00
mni_autoreg
mosdepth
mrbayes
mrtrix	mrtrix: 3.0.2 -> unstable-2021-11-25	2021-11-30 21:03:53 -08:00
muscle
N3
ncbi-tools
neuron
niftyreg
niftyseg	niftyseg: switch to fetchFromGitHub	2021-12-23 19:11:17 +01:00
obitools
octopus
paml
picard-tools	picard-tools: 2.26.6 -> 2.26.9	2021-12-22 22:20:36 +11:00
platypus
plink-ng
poretools
prodigal
quast
raxml
sambamba
samblaster
samtools	samtools: pull upstream fix for ncurses-6.3	2021-11-26 13:02:05 +00:00
seaview	seaview: 5.0.4 -> 5.0.5	2021-12-12 15:59:16 +00:00
snpeff
somatic-sniper
sortmerna
spades
stacks
star
strelka
subread	subread: init 2.0.3	2021-12-14 13:30:23 +11:00
sumatools
svaba
tebreak
trimal
truvari
varscan
vcftools
whisper
xenomapper