forked from mirrors/nixpkgs
4a7f99d55d
Part of: https://github.com/NixOS/nixpkgs/issues/108938 meta = with stdenv.lib; is a widely used pattern. We want to slowly remove the `stdenv.lib` indirection and encourage people to use `lib` directly. Thus let’s start with the meta field. This used a rewriting script to mostly automatically replace all occurances of this pattern, and add the `lib` argument to the package header if it doesn’t exist yet. The script in its current form is available at https://cs.tvl.fyi/depot@2f807d7f141068d2d60676a89213eaa5353ca6e0/-/blob/users/Profpatsch/nixpkgs-rewriter/default.nix
33 lines
857 B
Nix
33 lines
857 B
Nix
{ lib, stdenv, fetchurl, jre, makeWrapper }:
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stdenv.mkDerivation rec {
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pname = "macse";
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version = "2.03";
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src = fetchurl {
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url = "https://bioweb.supagro.inra.fr/${pname}/releases/${pname}_v${version}.jar";
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sha256 = "0jnjyz4f255glg37rawzdv4m6nfs7wfwc5dny7afvx4dz2sv4ssh";
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};
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nativeBuildInputs = [ makeWrapper ];
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dontBuild = true;
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unpackPhase = ":";
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installPhase = ''
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runHook preInstall
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mkdir -p $out/share/java
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cp -s $src $out/share/java/macse.jar
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makeWrapper ${jre}/bin/java $out/bin/macse --add-flags "-jar $out/share/java/macse.jar"
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runHook postInstall
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'';
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meta = with lib; {
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description = "Multiple alignment of coding sequences";
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homepage = "https://bioweb.supagro.inra.fr/macse/";
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license = licenses.gpl2;
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maintainers = [ maintainers.bzizou ];
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platforms = platforms.all;
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};
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}
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