{ lib, fetchPypi, python, buildPythonPackage, gfortran, pytest, blas, writeTextFile, isPyPy }: let blasImplementation = lib.nameFromURL blas.name "-"; cfg = writeTextFile { name = "site.cfg"; text = (lib.generators.toINI {} { "${blasImplementation}" = { include_dirs = "${blas}/include"; library_dirs = "${blas}/lib"; } // lib.optionalAttrs (blasImplementation == "mkl") { mkl_libs = "mkl_rt"; lapack_libs = ""; }; }); }; in buildPythonPackage rec { pname = "numpy"; version = "1.16.4"; src = fetchPypi { inherit pname version; extension = "zip"; sha256 = "7242be12a58fec245ee9734e625964b97cf7e3f2f7d016603f9e56660ce479c7"; }; nativeBuildInputs = [ gfortran pytest ]; buildInputs = [ blas ]; patches = lib.optionals python.hasDistutilsCxxPatch [ # We patch cpython/distutils to fix https://bugs.python.org/issue1222585 # Patching of numpy.distutils is needed to prevent it from undoing the # patch to distutils. ./numpy-distutils-C++.patch ]; preConfigure = '' sed -i 's/-faltivec//' numpy/distutils/system_info.py export NPY_NUM_BUILD_JOBS=$NIX_BUILD_CORES ''; preBuild = '' ln -s ${cfg} site.cfg ''; enableParallelBuilding = true; doCheck = !isPyPy; # numpy 1.16+ hits a bug in pypy's ctypes, using either numpy or pypy HEAD fixes this (https://github.com/numpy/numpy/issues/13807) checkPhase = '' runHook preCheck pushd dist ${python.interpreter} -c 'import numpy; numpy.test("fast", verbose=10)' popd runHook postCheck ''; passthru = { blas = blas; inherit blasImplementation cfg; }; # Disable two tests # - test_f2py: f2py isn't yet on path. # - test_large_file_support: takes a long time and can cause the machine to run out of disk space NOSE_EXCLUDE="test_f2py,test_large_file_support"; meta = { description = "Scientific tools for Python"; homepage = http://numpy.scipy.org/; maintainers = with lib.maintainers; [ fridh ]; }; }