{ stdenv , python }: python.buildPythonPackage rec { pname = "snakemake"; version = "5.2.2"; propagatedBuildInputs = with python; [ appdirs ConfigArgParse datrie docutils jsonschema pyyaml ratelimiter requests wrapt ]; src = python.fetchPypi { inherit pname version; sha256 = "adffe7e24b4a613a9e8bf0a2a320b3cea236d86afb9132bb0bbbc08b8e35a3a3"; }; doCheck = false; # Tests depend on Google Cloud credentials at ${HOME}/gcloud-service-key.json meta = with stdenv.lib; { homepage = http://snakemake.bitbucket.io; license = licenses.mit; description = "Python-based execution environment for make-like workflows"; longDescription = '' Snakemake is a workflow management system that aims to reduce the complexity of creating workflows by providing a fast and comfortable execution environment, together with a clean and readable specification language in Python style. Snakemake workflows are essentially Python scripts extended by declarative code to define rules. Rules describe how to create output files from input files. ''; }; }