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3038 commits

Author SHA1 Message Date
Franz Pletz 6b10b78872
Merge remote-tracking branch 'origin/master' into gcc-9 2019-11-03 14:44:12 +01:00
Franz Pletz 8e63a6cd13
niftyreg: fix build with gcc9 2019-11-03 14:43:37 +01:00
Franz Pletz dffcb87383
colmap: fix build with gcc9 2019-11-03 14:43:33 +01:00
R. RyanTM 28b0a6a9e0 star: 2.7.2b -> 2.7.3a 2019-11-03 10:23:05 +01:00
R. RyanTM 1faee87692 dcmtk: 3.6.4 -> 3.6.5 2019-11-02 11:12:28 -07:00
Franz Pletz e39773fe5b
megahit: 1.1.4 -> 1.2.9 2019-11-02 15:53:57 +01:00
Gabriel Ebner ac24901d17
libqalculate: 3.4.0 -> 3.5.0 (#72550) 
libqalculate: 3.4.0 -> 3.5.0
 2019-11-02 10:59:06 +01:00
Gabriel Ebner a4f0bfdc87 qalculate-gtk: 3.4.0 -> 3.5.0 2019-11-02 10:54:10 +01:00
Jörg Thalheim 04a079082c
Merge pull request #72539 from r-ryantm/auto-update/jmol 
jmol: 14.29.54 -> 14.29.55
 2019-11-02 07:49:50 +00:00
R. RyanTM b3799c5627 jmol: 14.29.54 -> 14.29.55 2019-11-02 00:16:58 -07:00
R. RyanTM 7f919914bf eprover: 2.3 -> 2.4 2019-11-01 14:00:31 -07:00
Timo Kaufmann f7c1e8f274
Merge pull request #72328 from timokau/sage-ignore-cmp-deprecation 
sage: ignore attrs deprecation warning
 2019-10-30 23:14:07 +01:00
Timo Kaufmann 32827e35d8 sage: ignore attrs deprecation warning 
cmp is deprecated since attrs 19.2.0:
http://www.attrs.org/en/19.2.0/changelog.html

The deprecation warning breaks the doctests.  Fortunately they have a
rather long deprecation window, so we can just wait until upstream(s)
fix this.
 2019-10-30 22:27:00 +01:00
Peter Simons 3bc76218a3
Merge pull request #72058 from nh2/r-static-library 
R: Add enableShared/enableStatic arguments
 2019-10-30 13:31:52 +01:00
Niklas Hambüchen edbe2d8145 R: Add static argument. 
R's autoconf does not use the normal configure flags for that.
 2019-10-30 11:44:02 +01:00
Ben Darwin ddc2955ad9 EZminc: 2017-08-29 -> 2019-07-25; mark unbroken 2019-10-26 09:55:30 -07:00
Alexey Shmalko 140d402cb5
Merge pull request #71991 from iimog/dcmtk 
DCMTK: init at 3.6.4
 2019-10-26 15:15:50 +03:00
Markus Ankenbrand 905245b32c dcmtk: init at 3.6.4 2019-10-26 13:02:50 +02:00
Vincent Laporte a8892b0d76
coq_8_10: 8.10.0 → 8.10.1 2019-10-25 07:58:47 +00:00
Vincent Laporte d56582eb2b coq_8_10: enable CoqIDE 2019-10-25 07:58:02 +00:00
scalavision 535a7006ea truvari: init at 1.3.2 (#70877) 
pythonPackages.pyvcf: init at 0.6.8
 2019-10-24 17:06:42 -04:00
R. RyanTM c6af1f6e03 verilator: 4.018 -> 4.020 
Semi-automatic update generated by
https://github.com/ryantm/nixpkgs-update tools. This update was made
based on information from
https://repology.org/metapackage/verilator/versions
 2019-10-24 14:02:00 -05:00
R. RyanTM c300055e11 ott: 0.28 -> 0.29 
Semi-automatic update generated by
https://github.com/ryantm/nixpkgs-update tools. This update was made
based on information from
https://repology.org/metapackage/ott/versions
 2019-10-23 11:44:13 -07:00
R. RyanTM b8acb48b24 picard-tools: 2.20.8 -> 2.21.1 (#71748) 
Semi-automatic update generated by
https://github.com/ryantm/nixpkgs-update tools. This update was made
based on information from
https://repology.org/metapackage/picard-tools/versions
 2019-10-23 09:34:40 +02:00
R. RyanTM a9551de99a dcm2niix: 1.0.20190410 -> 1.0.20190902 
Semi-automatic update generated by
https://github.com/ryantm/nixpkgs-update tools. This update was made
based on information from
https://repology.org/metapackage/dcm2niix/versions
 2019-10-22 16:31:19 -07:00
Timo Kaufmann ed145e8f22
Merge pull request #71694 from r-ryantm/auto-update/nauty 
nauty: 26r11 -> 26r12
 2019-10-22 23:33:48 +02:00
R. RyanTM d93659ffa0 nauty: 26r11 -> 26r12 
Semi-automatic update generated by
https://github.com/ryantm/nixpkgs-update tools. This update was made
based on information from
https://repology.org/metapackage/nauty/versions
 2019-10-22 10:14:36 -07:00
R. RyanTM dbab6b7994 jmol: 14.29.53 -> 14.29.54 
Semi-automatic update generated by
https://github.com/ryantm/nixpkgs-update tools. This update was made
based on information from
https://repology.org/metapackage/jmol/versions
 2019-10-22 10:06:52 +02:00
Mario Rodas e8e1f42499
Merge pull request #71590 from r-ryantm/auto-update/ginac 
ginac: 1.7.7 -> 1.7.8
 2019-10-21 20:21:31 -05:00
R. RyanTM bf30d5d6f6 ginac: 1.7.7 -> 1.7.8 
Semi-automatic update generated by
https://github.com/ryantm/nixpkgs-update tools. This update was made
based on information from
https://repology.org/metapackage/ginac/versions
 2019-10-21 15:21:33 -07:00
Michael Raskin a35022aa80
Merge pull request #71566 from r-ryantm/auto-update/golly 
golly: 3.2 -> 3.3
 2019-10-21 19:41:50 +00:00
R. RyanTM b73b9399ba golly: 3.2 -> 3.3 
Semi-automatic update generated by
https://github.com/ryantm/nixpkgs-update tools. This update was made
based on information from
https://repology.org/metapackage/golly/versions
 2019-10-21 11:24:52 -07:00
Renaud 410d794f05
Merge pull request #71073 from nyanloutre/betaflight_configurator_10_6_0 
betaflight-configurator: 10.5.1 -> 10.6.0
 2019-10-20 20:01:00 +02:00
Ben Wolsieffer 8d04355d87 qgroundcontrol: 3.3.0 -> 3.5.5, fix build (#71308) 
* qgroundcontrol: 3.3.0 -> 3.5.4, fix build

* qgroundcontrol: 3.5.4 -> 3.5.5
 2019-10-20 19:27:23 +02:00
Emily fecfbe18bd symbiyosys: 2019.08.13 -> 2019.10.11 2019-10-19 12:26:49 -05:00
Daniel Frank b4136a8f5b kicad: 5.1.2 -> 5.1.4, fix ngspice, mark broken on aarch64 (#69584) 2019-10-16 02:02:49 -04:00
Vincent Laporte b4db381443 coq_8_10: 8.10+β3 → 8.10.0 
coqPackages.coq-elpi: master → 1.1.0
 2019-10-16 02:43:46 +00:00
Vincent Laporte 0cc70b5697 coq: do not build CoqIDE for Coq 8.10 
GTK3 at version 3.24.11 has broken pkg-config files
 2019-10-16 02:43:46 +00:00
Vincent Laporte 1292f49a37 coq_8_10: do not take “camlp5” as input 2019-10-16 02:43:46 +00:00
Vincent Laporte 325f89ef19 coq_8_10: fix CoqIDE on darwin 2019-10-16 02:43:46 +00:00
worldofpeace 4bcef38f24
Merge pull request #63827 from acairncross/fix-monosat 
monosat: Fix Linux build
 2019-10-15 20:55:28 +00:00
Aiken Cairncross 15dbd8de7c monosat: 60528a3 -> 1.8.0 
This fixes the broken Linux build by only building the dynamic library/
executable (an option that was only added in the latest tagged version).
 2019-10-15 16:52:25 -04:00
Aiken Cairncross b4da391ade monosat: Add self as maintainer 2019-10-15 12:20:55 +01:00
Millian Poquet 5b9cbeb75c simgrid: 3.23 -> 3.24 2019-10-14 16:08:43 +02:00
Renaud e6f99fa3b1
Merge pull request #69961 from r-ryantm/auto-update/star 
star: 2.7.1a -> 2.7.2b
 2019-10-13 17:10:23 +02:00
nyanloutre d849c213ba
betaflight-configurator: 10.5.1 -> 10.6.0 2019-10-13 11:58:00 +02:00
Renaud 94500c93dc
Merge pull request #69515 from r-ryantm/auto-update/eagle 
eagle: 9.4.2 -> 9.5.0
 2019-10-12 15:09:07 +02:00
Renaud a12f3ebee7
Merge pull request #69488 from r-ryantm/auto-update/clp 
clp: 1.17.2 -> 1.17.3
 2019-10-12 14:15:31 +02:00
scalavision 3d860972ee delly: init at 0.8.1 (#70871) 2019-10-10 22:08:45 -04:00
worldofpeace dfe338e464
Merge pull request #70890 from worldofpeace/pantheon-no-lts-vala 
pantheon: use latest vala
 2019-10-10 15:18:38 +00:00