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4928 commits

Author SHA1 Message Date
Zhenya Vinogradov 6714723bfa sage: fix icon location in the kernel definition 
The icon location is incorrect, `doc` directory exists inside `src`
directory, but not on the top level.
 2021-08-19 12:20:35 +03:00
davidak f2b906617d
Merge pull request #134361 from Stunkymonkey/why3-phases 
why3: deprecate phases
 2021-08-19 04:06:56 +02:00
Ryan Mulligan ad59a67ec0
Merge pull request #134444 from r-ryantm/auto-update/picard-tools 
picard-tools: 2.25.1 -> 2.25.7
 2021-08-17 16:47:31 -07:00
Artturi 8ba3c63144
Merge pull request #133998 from r-ryantm/auto-update/wxmaxima 
wxmaxima: 21.02.0 -> 21.05.2
 2021-08-17 23:00:21 +03:00
Gabriel Ebner 65cafb6030
Merge pull request #134474 from r-ryantm/auto-update/qalculate-gtk 
qalculate-gtk: 3.19.0 -> 3.20.1
 2021-08-17 21:32:08 +02:00
Artturi 4f36420d07
Merge pull request #134045 from r-ryantm/auto-update/minimap2 
minimap2: 2.17 -> 2.22
 2021-08-17 22:22:47 +03:00
Ryan Mulligan 6cae9fd0c5
Merge pull request #134472 from r-ryantm/auto-update/vowpal-wabbit 
vowpal-wabbit: 8.10.0 -> 8.11.0
 2021-08-17 11:18:02 -07:00
R. RyanTM 73b3e147ea openhantek6022: 3.2.3 -> 3.2.4 2021-08-17 10:33:56 -07:00
R. RyanTM cbd7e0dec1 qalculate-gtk: 3.19.0 -> 3.20.1 2021-08-17 16:04:54 +00:00
R. RyanTM 6d139ed34f vowpal-wabbit: 8.10.0 -> 8.11.0 2021-08-17 15:59:33 +00:00
R. RyanTM 1a23a8bb9e picard-tools: 2.25.1 -> 2.25.7 2021-08-17 13:50:42 +00:00
Gabriel Ebner f267d39257
Merge pull request #134394 from r-ryantm/auto-update/elan 
elan: 1.0.6 -> 1.0.7
 2021-08-17 10:03:05 +02:00
R. RyanTM b1868a8296 elan: 1.0.6 -> 1.0.7 2021-08-17 03:53:13 +00:00
Felix Buehler c849ada0c5 why3: deprecate phases 2021-08-16 22:50:19 +02:00
Felix Buehler 8a8a949ffd tlaplusToolbox: deprecate phases 2021-08-16 21:54:44 +02:00
Felix Buehler 8ad1a7859a tlaps: deprecate phases 2021-08-16 21:54:22 +02:00
R. RyanTM 5caebbb040 verilator: 4.202 -> 4.210 2021-08-14 17:01:17 -05:00
R. RyanTM 5693a554e2 minimap2: 2.17 -> 2.22 2021-08-14 15:55:35 +00:00
R. RyanTM 0ba50b681e wxmaxima: 21.02.0 -> 21.05.2 2021-08-14 11:51:36 +00:00
Michael Raskin 1350415b52
Merge pull request #127798 from PhDyellow/r_bump_version 
R: 4.0.4 -> 4.1.0
 2021-08-13 13:41:07 +00:00
Phil Dyer a21caa7f19 Remove unused fetchpatch from inputs 2021-08-13 10:19:31 +10:00
Phil Dyer 7f07184a8e Add Patch for aarch64 2021-08-13 10:16:59 +10:00
Sandro 7d75a19c60
Merge pull request #131463 from angustrau/logisim-evolution 2021-08-12 12:22:42 +02:00
Artturi 8ebdf7ec6b
Merge pull request #133322 from r-ryantm/auto-update/ginac 
ginac: 1.8.0 -> 1.8.1
 2021-08-11 23:01:14 +03:00
Phil Dyer d37edcd3d5 R: 4.1.0 -> 4.1.1 2021-08-11 16:41:53 +10:00
R. RyanTM e36200fc36 ginac: 1.8.0 -> 1.8.1 2021-08-10 07:09:09 +00:00
Artturi 5a587da43c
Merge pull request #133187 from Stunkymonkey/plm-fix 
plm: fix old link & deprecate phases
 2021-08-10 04:39:14 +03:00
Artturi ae50676a71
Merge pull request #133235 from r-ryantm/auto-update/jmol 
jmol: 14.31.46 -> 14.31.49
 2021-08-10 03:36:07 +03:00
R. RyanTM 72a522e795 jmol: 14.31.46 -> 14.31.49 2021-08-09 07:27:37 +00:00
R. RyanTM 323134240a gama: 2.12 -> 2.14 2021-08-09 00:26:53 +00:00
Felix Buehler d62ab96698 plm: fix old link & deprecate phases 2021-08-08 23:53:53 +02:00
Dmitry Kalinkin e51edc1e64
Merge pull request #130903 from veprbl/pr/cwltool 
cwltool: init at 3.1.20210628163208
 2021-08-08 11:15:33 -04:00
Sandro 93ead26f57
Merge pull request #130359 from sheepforce/avogadro2 2021-08-08 13:07:33 +02:00
Sandro fd26f351b5
Merge pull request #131493 from collares/polymake-4.4 
polymake: 3.2.rc4 -> 4.4
 2021-08-08 12:30:59 +02:00
Jörg Thalheim 5ec2eafb18
Merge pull request #125133 from sophrosyne97/fix_vhd2vl 
vhd2vl: fix build error
 2021-08-08 11:12:45 +01:00
Sandro bfd533061e
Merge pull request #132881 from r-ryantm/auto-update/lepton-eda 2021-08-07 12:11:38 +02:00
Artturi e69c8ea78e
Merge pull request #111691 from jbedo/bowtie2 
bowtie2: resolve missing runtime dependencies
 2021-08-07 04:03:47 +03:00
R. RyanTM d06fec649b lepton-eda: 1.9.13-20201211 -> 1.9.16-20210731 2021-08-06 09:59:50 +00:00
Sandro cfdee1710c
Merge pull request #109552 from tesq0/merge-request-lepton-eda 2021-08-05 15:35:14 +02:00
Mikolaj Galkowski 629e1d384d lepton-eda: init at 1.9.13-20201211 2021-08-05 14:18:10 +02:00
Markus Kowalewski d26039d43b
openmolcas: 21.02 -> 21.06 2021-08-05 13:18:28 +02:00
Sandro 04b5e62d8d
Merge pull request #132468 from Stunkymonkey/applications-phases1 2021-08-05 09:37:57 +02:00
Markus Kowalewski 7d3b20253f
ergoscf: init at 3.8 2021-08-04 00:29:52 +02:00
Stig c464dc811b
Merge pull request #132237 from Artturin/perlmagikupdate 
perlPackages.ImageMagick: 7.0.10 -> 7.0.11
 2021-08-03 00:16:14 +02:00
Felix Buehler be219752d2 picard-tools: deprecate phases 2021-08-03 00:04:29 +02:00
Felix Buehler 4b883542fe varscan: deprecate phases 2021-08-03 00:04:16 +02:00
Felix Buehler e3dd43360e eagle7: deprecate phases 2021-08-03 00:03:58 +02:00
Felix Buehler f67a0a37f0 saw-tools: remove phases 2021-08-03 00:03:41 +02:00
Felix Buehler 7b20eb9e37 scilab-bin: remove phases 2021-08-03 00:03:12 +02:00
Felix Buehler 44cb64dba6 quantomatic: deprecate phases 2021-08-03 00:02:58 +02:00