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876 commits

Author SHA1 Message Date
Rémy Grünblatt db079ab798 ns-3: 3.33 -> 3.34 2021-08-20 14:17:10 +02:00
R. RyanTM 3c3d2edc09 openspecfun: 0.5.3 -> 0.5.5 2021-08-15 16:36:56 +00:00
Sandro 93ead26f57
Merge pull request #130359 from sheepforce/avogadro2 2021-08-08 13:07:33 +02:00
Ben Siraphob 54bc3fd519
Merge pull request #110249 from r-ryantm/auto-update/petsc 
petsc: 3.14.2 -> 3.14.3
 2021-07-31 19:06:35 +07:00
Frederik Rietdijk 8dcfe523f7
Merge pull request #131719 from FRidh/python2-to-3 
Python: further migrate packages from 2 to 3
 2021-07-29 10:49:00 +02:00
Frederik Rietdijk dc04d776a3 mirtk: use python3 2021-07-27 20:42:00 +02:00
Phillip Seeber 43e749aa76 avogadrolibs: init at 1.94.0 
avogadrolibs: review comments
 2021-07-27 18:43:15 +02:00
Phillip Seeber b5bf1346c0 molequeue: init at 0.9.0 
molequeue: review comments
 2021-07-27 18:43:15 +02:00
Phillip Seeber 3ea182f321 mmtf-cpp: init at 1.0.0 2021-07-27 18:43:15 +02:00
Phillip Seeber a54c0b9503 libmsym: init at 0.2.3 
libmsym: code-review stuff
 2021-07-27 18:43:15 +02:00
Sandro Jäckel 57c3d06e2c liblapack: 3.9.1 -> 3.10.0 2021-07-22 14:03:57 -07:00
github-actions[bot] 382fdc7ad3
Merge master into staging-next 2021-07-18 00:01:24 +00:00
Sandro b4176ae90a
Merge pull request #130472 from Stunkymonkey/inherit-version3 
various: cleanup of "inherit version;"
 2021-07-18 00:38:39 +02:00
Felix Buehler e023025ee0 various: cleanup of "inherit version;" 2021-07-17 22:39:35 +02:00
Ben Siraphob 8ff57341d1
Merge pull request #130459 from hjones2199/wcs77 
wcslib: 7.6 -> 7.7
 2021-07-18 02:12:20 +07:00
Hunter Jones c6bd32b06a wcslib: 7.6 -> 7.7 2021-07-17 09:53:34 -05:00
Jörg Thalheim 7afa51c2bd Merge remote-tracking branch 'upstream/master' into HEAD 2021-07-14 15:45:51 +02:00
Sandro Jäckel 388a4ef423
treewide: convert all links git.archlinux.org to github.com/archlinux/svntogit-* 2021-07-14 03:35:21 +02:00
github-actions[bot] 56d22e36bd
Merge master into staging-next 2021-07-12 12:01:28 +00:00
Carsten Burstedde cf4b4bdbea
petsc: specify python3 and remove unneeded patch 2021-07-06 23:10:19 +02:00
Carsten Burstedde 80697bfb8e
petsc: build with p4est for all platforms 
Recent master updates make p4est build on aarch64 and darwin.
Undo their deactivation in the petsc build.
 2021-07-06 07:20:21 +02:00
Carsten Burstedde 25456656ef
Merge branch 'master' into package-petsc-p4est 2021-07-06 07:19:35 +02:00
Carsten Burstedde 27b512299f
petsc: restrict patchSheBang; use configureScript 
The configure script can be called with python via configureScript.
This leaves only ./lib/petsc/bin to be patched.
 2021-07-06 07:13:59 +02:00
github-actions[bot] 3ddb8d5a79
Merge staging-next into staging 2021-07-06 00:02:03 +00:00
Sandro da0ccc6f62
Merge pull request #129350 from cburstedde/package-p4est-sc 2021-07-05 23:44:58 +02:00
github-actions[bot] a28ba52cac
Merge staging-next into staging 2021-07-05 18:01:46 +00:00
github-actions[bot] e16d818a0b
Merge master into staging-next 2021-07-05 18:01:11 +00:00
Carsten Burstedde 65e659f0f4
p4est, p4est-sc: fix checks with OpenMPI 
Setting environment variables in preCheck to make MPI tests run.
This is one commit for two packages in order not to break the dependency.
 2021-07-05 19:59:57 +02:00
Carsten Burstedde 705afbd338
Merge branch 'master' into package-petsc-p4est 2021-07-05 19:30:59 +02:00
Carsten Burstedde c99a5b9a60
petsc: do not build with p4est on darwin 2021-07-05 16:58:59 +02:00
Carsten Burstedde 87da2a0414
petsc: do not build with p4est on aarch64 2021-07-05 15:39:02 +02:00
Carsten Burstedde 56a6d5245d
p4est: refactor using p4est-sc.configureFlags 
Switch to using p4est-sc.configureFlags as starting point.
This removes some redundancy between both packages.
 2021-07-05 12:00:02 +02:00
Carsten Burstedde 6c00893063
p4est-sc: refactor mpi and pthread support 
On aarch64, the tests won't run with MPI, hence disabling MPI there.
Add -pthread to CFLAGS unconditionally via --enable-pthread.
Check for "openmpi" pname and not package equality with mpi.
 2021-07-05 11:59:50 +02:00
github-actions[bot] c852543c1f
Merge staging-next into staging 2021-07-04 06:01:43 +00:00
github-actions[bot] 89ee82a6e9
Merge master into staging-next 2021-07-04 06:01:11 +00:00
R. RyanTM b84b5172a9 blas-reference: 3.8.0 -> 3.10.0 
fixup references to ARCH and ARCHFLAGS which have been renamed AR
and ARFLAGS respectively
 2021-07-03 20:09:42 +01:00
Ben Siraphob 5977d7f5c4
Merge pull request #127003 from Stunkymonkey/3pname&name 2021-07-02 08:29:36 +07:00
Felix Buehler 58a2d4b666 development: /s/name/pname&version/ 2021-07-02 00:03:10 +02:00
Carsten Burstedde bcf9629def
petsc: remove unnecessary configure options 2021-07-01 22:57:25 +02:00
Carsten Burstedde ce30d367c1
petsc: assert requirement for p4est.mpiSupport 2021-07-01 22:57:25 +02:00
Carsten Burstedde dbf5898462
petsc: simplify blas, lapack dependencies 2021-07-01 22:27:03 +02:00
Carsten Burstedde 8834c5399c
petsc: address couple suggestions 2021-07-01 22:16:56 +02:00
Carsten Burstedde 72c23a3469
petsc: refactor using mpi and p4est 2021-07-01 10:07:12 +02:00
github-actions[bot] 7f05df0a91
Merge master into staging-next 2021-06-30 06:04:18 +00:00
Sandro 4b3cb7c6ee
Apply suggestions from code review 2021-06-30 02:23:34 +02:00
Felix Buehler bf884a789e openspecfun: use fetchFromGitHub and pname&version 2021-06-29 23:22:56 +02:00
Carsten Burstedde 2bd08c849a
p4est: init at unstable-2021-06-22 2021-06-28 09:41:14 +02:00
Carsten Burstedde eb396b1587
p4est-sc: init at unstable-2021-06-14 2021-06-27 19:50:53 +02:00
github-actions[bot] 1016b5a6ba
Merge staging-next into staging 2021-06-27 00:10:43 +00:00
Sandro c890f178ac
Merge pull request #128240 from hjones2199/indi191 
indilib: 1.9.0 -> 1.9.1
 2021-06-26 21:58:22 +02:00