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4938 commits

Author SHA1 Message Date
Pjotr Prins d78d018ad8 Added ncbi-tools
svn path=/nixpkgs/trunk/; revision=12003
2008-06-06 19:42:00 +00:00
Eelco Dolstra bb2a310c5c * Cleaned up the PHP expression. Added support for GD. Also
turned on PostgreSQL support by default (maybe I shouldn't,
  since it makes PHP rather dependency-heavy...).

svn path=/nixpkgs/trunk/; revision=12002
2008-06-06 13:03:55 +00:00
Ludovic Courtès 32588e53ef Add pmccabe, a tool that computes the cyclomatic complexity of C/C++ source.
svn path=/nixpkgs/trunk/; revision=12000
2008-06-06 12:26:01 +00:00
Pjotr Prins f9e018c80d biology/paml added
svn path=/nixpkgs/trunk/; revision=11997
2008-06-06 08:23:49 +00:00
Eelco Dolstra dfb4b8d51c * dietlibc / static stdenvs: use original fetchurl.
svn path=/nixpkgs/trunk/; revision=11996
2008-06-06 08:01:26 +00:00
Michael Raskin 7ed0f3983d Not using dependencies when building statically..
svn path=/nixpkgs/trunk/; revision=11995
2008-06-06 07:50:52 +00:00
Pjotr Prins efa2ae30bd Control for biology packages
svn path=/nixpkgs/trunk/; revision=11994
2008-06-05 17:15:27 +00:00
Pjotr Prins 62c9176206 Added emboss
svn path=/nixpkgs/trunk/; revision=11993
2008-06-05 17:14:33 +00:00
Pjotr Prins 5866a8b101 tabs2spaces of .nix file
svn path=/nixpkgs/trunk/; revision=11992
2008-06-05 16:58:41 +00:00
Eelco Dolstra 125c7ea4e3 * Qemu: apply the Samba patch from KVM.
svn path=/nixpkgs/trunk/; revision=11991
2008-06-05 15:43:06 +00:00
Pjotr Prins 13463a6f01 MrBayes - a biology package for phylogeny
svn path=/nixpkgs/trunk/; revision=11986
2008-06-05 13:35:45 +00:00
Eelco Dolstra c955f608a2 * KVM 69. Seems to improve performance quite a bit. In particular it
implements the host support for virtio devices in Linux >= 2.6.25
  guests.  Network performance shows a huge improvement with
  virtio_net, which should be good for the build farm (which uses
  Samba/CIFS to mount the file system of the host).
* Kernel headers for 2.6.26-rc5 added to build KVM 69.  Also added the
  2.6.25 headers, which turned out to be too old for KVM 69.

svn path=/nixpkgs/trunk/; revision=11985
2008-06-05 10:59:41 +00:00
Ludovic Courtès e24afc19ad Add OProfile, a system-wide profiler for Linux.
svn path=/nixpkgs/trunk/; revision=11984
2008-06-04 21:23:30 +00:00
Andres Löh 12ca68d114 Added a preliminary expression for Coq (no IDE support yet).
svn path=/nixpkgs/trunk/; revision=11983
2008-06-04 15:10:05 +00:00
Andres Löh 2991f9adef * layout changes
svn path=/nixpkgs/trunk/; revision=11981
2008-06-04 14:24:28 +00:00
Andres Löh d025d67118 * layout changes
svn path=/nixpkgs/trunk/; revision=11980
2008-06-04 14:03:20 +00:00
Eelco Dolstra 41892afe9f svn path=/nixpkgs/trunk/; revision=11979 2008-06-04 11:59:42 +00:00
Eelco Dolstra 5edae446d8 * Move jedit to editors/jedit.
svn path=/nixpkgs/trunk/; revision=11978
2008-06-04 11:48:11 +00:00
Eelco Dolstra 5d6247cb96 * Use 0.4.
svn path=/nixpkgs/branches/stdenv-updates/; revision=11977
2008-06-04 11:27:35 +00:00
Eelco Dolstra 9029c3b61f * NVIDIA driver: set a RUNPATH on libGL.so and friends. This ensures
that applications that link against it don't need to have its
  dependencies (like libXext) in *their* RUNPATHs.
* glxinfo: don't add /var/run/opengl-driver/lib to the RUNPATH.
  Instead LD_LIBRARY_PATH should be set to
  /var/run/opengl-driver/lib at runtime.  This is much more pure, and
  it obviates the need for patchelfing all OpenGL applications.
  (TODO: remove patchelf hacks for other OpenGL programs as well.)

svn path=/nixpkgs/branches/stdenv-updates/; revision=11972
2008-06-04 09:59:33 +00:00
Andres Löh b89a5bfa33 lhs2tex version bump to 1.13, removed the external builder.sh
svn path=/nixpkgs/trunk/; revision=11971
2008-06-04 09:59:13 +00:00
Eelco Dolstra dcf01e5925 * A convenience function `makeLibraryPath' that adds "/lib" to each
element of a list and concatenates them separated by colons.

svn path=/nixpkgs/branches/stdenv-updates/; revision=11970
2008-06-04 09:56:11 +00:00
Andres Löh ec984a1208 Added a ghc-6.8.3 snapshot (with version number 6.8.2.20080602).
svn path=/nixpkgs/trunk/; revision=11969
2008-06-04 09:42:25 +00:00
Andres Löh dbddb786cc Remove a patch that is no longer used and needed.
svn path=/nixpkgs/trunk/; revision=11968
2008-06-04 09:40:17 +00:00
Eelco Dolstra 7d0bc40935 * Install the Zabbix PHP frontend and the SQL schemata/data.
svn path=/nixpkgs/trunk/; revision=11965
2008-06-04 08:45:00 +00:00
Eelco Dolstra b4bd1c888a * Added Zabbix, a system and network monitoring tool.
svn path=/nixpkgs/trunk/; revision=11963
2008-06-03 21:59:35 +00:00
Ludovic Courtès c28744816a Valgrind: Fix `callgrind_annotate'.
svn path=/nixpkgs/trunk/; revision=11962
2008-06-03 21:25:58 +00:00
Ludovic Courtès ec86f5b6b4 Valgrind: Fix dependencies.
svn path=/nixpkgs/trunk/; revision=11961
2008-06-03 20:56:12 +00:00
Eelco Dolstra c6e98aeba3 * Doh!
svn path=/nixpkgs/branches/stdenv-updates/; revision=11959
2008-06-03 14:36:15 +00:00
Eelco Dolstra 5fadd928bc * Use a fixed patchelf.
svn path=/nixpkgs/branches/stdenv-updates/; revision=11958
2008-06-03 14:29:14 +00:00
Michael Raskin b534077ffe Added updated Atheros and fresh HAL version
svn path=/nixpkgs/trunk/; revision=11953
2008-06-03 07:41:52 +00:00
Eelco Dolstra 0d0b6afd53 * Latest nvidia driver.
svn path=/nixpkgs/trunk/; revision=11949
2008-06-02 13:40:04 +00:00
Michael Raskin b98a144355 Added a generator for CPAN expressions. Expressions often require manual editing, but still something..
svn path=/nixpkgs/trunk/; revision=11947
2008-06-02 08:21:38 +00:00
Ludovic Courtès 8b83b37ec5 GNU gv 3.6.4.
svn path=/nixpkgs/trunk/; revision=11946
2008-06-01 16:51:03 +00:00
Nicolas Pierron 9768f41783 Add PyX: Python graphics package.
svn path=/nixpkgs/trunk/; revision=11945
2008-06-01 16:06:18 +00:00
Nicolas Pierron 6f08adf32b Install the emacs syntax highlighter for taskJuggler.
svn path=/nixpkgs/trunk/; revision=11944
2008-06-01 16:06:09 +00:00
Marc Weber 898f448073 added mysql2pgsql (mysql dump to postrges sql converter) script
svn path=/nixpkgs/trunk/; revision=11943
2008-05-31 22:49:00 +00:00
Armijn Hemel a65e05bbaf update to 2.4.6, python import problems are still there:
(gimp:9911): LibGimpBase-WARNING **: gimp: gimp_wire_read(): error
Traceback (most recent call last):
  File "/nix/store/41hi79yr3k46yx98yfanpxbdcdslbgql-gimp-2.4.6/lib/gimp/2.0/plug-ins/happy-valley-relief.py", line 20, in ?
    from gimpfu import *
  File "/nix/store/41hi79yr3k46yx98yfanpxbdcdslbgql-gimp-2.4.6/lib/gimp/2.0/python/gimpfu.py", line 74, in ?
    import gimp
ImportError: could not import pygtk

svn path=/nixpkgs/trunk/; revision=11942
2008-05-31 11:59:41 +00:00
Michael Raskin 47e9ed0386 Fixed tailor expression
svn path=/nixpkgs/trunk/; revision=11941
2008-05-31 07:26:13 +00:00
Marc Weber 18d227c98d added GetOptions, tar, unix-compat ghc haskell libraries
svn path=/nixpkgs/trunk/; revision=11940
2008-05-30 22:37:58 +00:00
Marc Weber 026d26ec9f Updated hash of hasktags
svn path=/nixpkgs/trunk/; revision=11939
2008-05-30 19:16:22 +00:00
Michael Raskin ccf2d30c59 Added SVK.
svn path=/nixpkgs/trunk/; revision=11937
2008-05-30 18:15:25 +00:00
Michael Raskin eb767152f5 Some exposing of compilation options in Subversion.
svn path=/nixpkgs/trunk/; revision=11936
2008-05-30 16:04:00 +00:00
Nicolas Pierron 77175d5dc3 Add TaskJuggler: A project management tool.
svn path=/nixpkgs/trunk/; revision=11933
2008-05-29 19:12:53 +00:00
Eelco Dolstra eeb82eb2df * Wine 1.0rc2.
svn path=/nixpkgs/trunk/; revision=11932
2008-05-29 15:36:15 +00:00
Eelco Dolstra 0901882c1e * Use the latest patchelf.
svn path=/nixpkgs/branches/stdenv-updates/; revision=11931
2008-05-29 14:19:34 +00:00
Eelco Dolstra 25245042c2 * Turn on ld's --enable-new-dtags option by default to get RUNPATHs
instead of RPATHs.  Borrowed from Gentoo.

svn path=/nixpkgs/branches/stdenv-updates/; revision=11930
2008-05-29 14:16:35 +00:00
Eelco Dolstra 961eddeb7d * Fix for compiling on Linux >= 2.6.24.
svn path=/nixpkgs/trunk/; revision=11929
2008-05-29 13:22:12 +00:00
Eelco Dolstra e466241a8d * On Linux 2.6.25, the arch files for i386 and x86_64 are unified in
arch/x86, so copy them from the right location.

svn path=/nixpkgs/trunk/; revision=11928
2008-05-29 13:21:47 +00:00
Ludovic Courtès ecc5f11e65 Add Stalin, an efficient Scheme compiler.
svn path=/nixpkgs/trunk/; revision=11927
2008-05-29 12:10:10 +00:00