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Author SHA1 Message Date
github-actions[bot] 49721bed32
Merge staging-next into staging 2021-05-01 18:26:21 +00:00
Sandro 4b2c9640e7
Merge pull request #120613 from erikbackman/master 2021-05-01 18:42:40 +02:00
John Ericson 17305d2df0
Merge pull request #111487 from Ericson2314/llvm-outputs-and-cross-compile-tools 
llvmPackages: Clean up outputs
 2021-04-30 11:28:08 -04:00
github-actions[bot] d7882499f8
Merge staging-next into staging 2021-04-30 12:26:14 +00:00
Michael Raskin ee4684f052
Merge pull request #117716 from idontgetoutmuch/master 
Fix https://github.com/NixOS/nixpkgs/issues/117715
 2021-04-30 07:28:43 +00:00
Andrew Childs 7869d16545 llvmPackages: Multuple outputs for everythting 
Also begin to start work on cross compilation, though that will have to
be finished later.

The patches are based on the first version of
https://reviews.llvm.org/D99484. It's very annoying to do the
back-porting but the review has uncovered nothing super major so I'm
fine sticking with what I've got.

Beyond making the outputs work, I also strove to re-sync the packages,
as they have been drifting pointlessly apart for some time.

----

Other misc notes, highly incomplete

- lvm-config-native and llvm-config are put in `dev` because they are
  tools just for build time.

- Clang no longer has an lld dep. That was introduced in
  db29857eb3, but if clang needs help
  finding lld when it is used we should just pass it flags / put in the
  resource dir. Providing it at build time increases critical path
  length for no good reason.

----

A note on `nativeCC`:

`stdenv` takes tools from the previous stage, so:

1. `pkgsBuildBuild`: `(?1, x, x)`
2. `pkgsBuildBuild.stdenv.cc`: `(?0, ?1, x)`

while:

1. `pkgsBuildBuild`: `(?1, x, x)`
2. `pkgsBuildBuild.targetPackages`: `(x, x, ?2)`
3. `pkgsBuildBuild.targetPackages.stdenv.cc`: `(?1, x, x)`
 2021-04-30 05:41:00 +00:00
Dominic Steinitz 732ab3d4e2 Incorporate suggeston by collares 2021-04-29 17:34:34 +01:00
github-actions[bot] 01105a117a
Merge staging-next into staging 2021-04-29 06:21:55 +00:00
R. RyanTM 5122077801 gmsh: 4.8.1 -> 4.8.3 2021-04-29 00:17:51 -04:00
erikbackman 95b40e4143 (numworks-epsilon): init at 15.3.2 2021-04-27 19:07:25 +02:00
github-actions[bot] 8634c6f7d1
Merge staging-next into staging 2021-04-26 00:17:03 +00:00
Mauricio Collares e1ad2f5aa4 sage: remove cypari2 override 
This reverts commit c12ef05bda.
 2021-04-25 18:21:58 -03:00
Michael Raskin 14f65f0dc5
Merge pull request #116365 from omasanori/sage-9.3 
sage: 9.2 -> 9.3
 2021-04-25 21:17:32 +00:00
github-actions[bot] 9a945aac72
Merge staging-next into staging 2021-04-25 18:14:18 +00:00
Eduardo Sánchez Muñoz 6b9e396a07 qalculate-gtk: 3.17.0 -> 3.18.0 2021-04-25 16:17:26 +02:00
github-actions[bot] 0d97d9f23b
Merge staging-next into staging 2021-04-23 00:15:42 +00:00
github-actions[bot] 481a9bc47c
Merge master into staging-next 2021-04-23 00:15:39 +00:00
R. RyanTM e230004975 calc: 2.12.9.1 -> 2.13.0.1 2021-04-22 06:59:52 +00:00
Masanori Ogino 090b71f627 sage: 9.2 -> 9.3.rc4 
Co-authored-by: Mauricio Collares <mauricio@collares.org>
 2021-04-22 14:06:56 +09:00
Mauricio Collares 00d2e24395 eclib: 20210223 -> 20190909 
This reverts commits 003705ef08
and ef615b5a61.
 2021-04-22 14:06:56 +09:00
Garaba Flórián a0f410646c sage: use threejs fork 2021-04-22 14:06:56 +09:00
Mauricio Collares 090165d7c1 singular: disable vspace on aarch64 2021-04-22 14:06:56 +09:00
Mauricio Collares cd7cf5942b singular: use older autoconf macro to unbreak aarch64 2021-04-22 09:01:30 +09:00
Mauricio Collares aebef1703f singular: import aarch64 support patch 2021-04-22 09:01:07 +09:00
Timo Kaufmann ceaf48fdb2 singular: 4.1.1p2 -> 4.2.0p2 
Adds proper tests. Also removes the "enableFactory" option because
singular actually enables factory by default and explicitly disabling it
breaks the build. So the option was never really available.
 2021-04-22 09:01:07 +09:00
Mauricio Collares cd215e793a pynac: 0.7.26 -> 0.7.27 2021-04-22 09:01:07 +09:00
Mauricio Collares 79046fb4f8 gap: 4.10.2 -> 4.11.0 2021-04-22 09:01:07 +09:00
github-actions[bot] cf0edc0dea
Merge staging-next into staging 2021-04-20 06:06:28 +00:00
github-actions[bot] e605a07cc0
Merge master into staging-next 2021-04-20 06:06:25 +00:00
R. RyanTM 44a83a3cb6 gmsh: 4.8.0 -> 4.8.1 2021-04-19 22:37:39 -04:00
Alyssa Ross e459db3f81 glsurf: fix license 
The README says GPL 2 or any later version, not LGPL.
 2021-04-16 14:06:10 +00:00
Alyssa Ross 70e33e3ae3 glsurf: use current giflib 
This requires bumping the version of camlimages used by glsurf to a
version that supports current giflib.  The most recent versions of
camlimages (even of 4.x) don't support ocaml 4.01 any more, so I've
upgraded to 4.1.2 here, the last version that supports ocaml 4.01 (and
which happily supports current giflib).
 2021-04-16 14:06:10 +00:00
Alyssa Ross 6e3b5fd046 libungif: remove in favour of giflib 
libungif was merged into giflib in 2006, and hasn't been updated
since.  All non-broken packages still using it build fine with giflib.

See <http://giflib.sourceforge.net/history.html>.
 2021-04-16 14:06:10 +00:00
github-actions[bot] 1bd1969867
Merge staging-next into staging 2021-04-06 18:15:33 +00:00
voidless b6c315b4fb geogebra6: 6_0_620_0 -> 6_0_631_0 2021-04-06 10:52:30 +02:00
Frederik Rietdijk 1e7ed8b2f3
Merge branch 'staging' into python-unstable 2021-04-04 12:59:12 +02:00
Frederik Rietdijk c12ef05bda sage: keep cypari2 at 2.1.1 2021-04-03 17:49:44 +02:00
Frederik Rietdijk 7368564f99 gurobi: stay with python2 2021-04-03 17:06:08 +02:00
Frederik Rietdijk ee258981bf ginac: use python3 2021-04-03 17:06:07 +02:00
R. RyanTM 190a6f04b6 calc: 2.12.9.0 -> 2.12.9.1 2021-03-27 07:21:16 +00:00
Dominic Steinitz 9eb60bee0e Fix https://github.com/NixOS/nixpkgs/issues/117715 2021-03-26 18:18:42 +00:00
Timo Kaufmann 82e1bfa53d
Merge pull request #117123 from collares/cypari-update 
cypari2, cysignals: updates
 2021-03-24 21:38:04 +00:00
Mauricio Collares 812ffed96b gap: backport aarch64 patch 2021-03-23 22:09:29 -03:00
Mauricio Collares 594eda3b7d sage: patch intermittently failing test 2021-03-23 22:09:29 -03:00
Mauricio Collares 15fd117e71 cypari2: 2.1.1 -> 2.1.2 
* cypari2: 2.1.1 -> 2.1.2, patch to fix segfault

* sage: update test expectations
 2021-03-23 22:09:29 -03:00
Sandro 1c3d923aaa
Merge pull request #115685 from r-ryantm/auto-update/wxmaxima 
wxmaxima: 20.06.6 -> 21.02.0
 2021-03-22 01:08:42 +01:00
Mauricio Collares c0b869f19f sage: re-add pkgconfig input, it's not duplicated 2021-03-20 06:43:23 -03:00
Jan Tojnar 0136206b12
Merge branch 'master' into staging-next 2021-03-18 13:35:59 +01:00
Sandro fe4a249718
Merge pull request #116594 from NixOS/SuperSandro2000-patch-1 
sage: remove duplicated pkgconfig
 2021-03-17 11:10:10 +01:00
Sandro 2d01f4a96a
sage: remove duplicated pkgconfig 2021-03-17 09:24:07 +01:00
Samuel Gräfenstein b72ee5775c
treewide: gnome2.gtk -> gtk2 
Fix building with `config.allowAliases = false;`.
 2021-03-17 00:00:16 +01:00
github-actions[bot] 3b97019142
Merge master into staging-next 2021-03-14 06:17:28 +00:00
R. RyanTM 621f19d89c calc: 2.12.8.2 -> 2.12.9.0 2021-03-13 23:43:28 -05:00
github-actions[bot] d6257d451b
Merge master into staging-next 2021-03-11 18:23:54 +00:00
R. RyanTM 6dc1177c24 wxmaxima: 20.06.6 -> 21.02.0 2021-03-10 03:37:07 +00:00
Mauricio Collares f80271c7f0 sage: remove usage of deprecated numpy aliases 2021-03-09 21:28:46 -03:00
Mauricio Collares 3f02cdae14 sage: reenable pexpect interrupt test 2021-03-09 21:28:46 -03:00
Mauricio Collares edc78bb31f sage: update test expectations for arb and giac, prepare for pari 2.13 2021-03-09 20:54:55 -03:00
Mauricio Collares a0f55e48fa sage: use fetchSageDiff whenever possible 2021-03-09 20:54:55 -03:00
R. RyanTM 4142ae19e8 palp: 2.11 -> 2.20 2021-03-09 20:54:55 -03:00
Mauricio Collares d508147edc giac: 1.5.0-87 -> 1.6.0-47 2021-03-09 20:54:55 -03:00
Martin Weinelt 16f9e4da3a
Merge branch 'master' into staging-next 2021-03-09 17:05:41 +01:00
R. RyanTM 97a6e6e702 qalculate-gtk: 3.16.0 -> 3.17.0 2021-03-09 09:26:04 +00:00
github-actions[bot] dd7cbca2a6
Merge master into staging-next 2021-03-09 06:17:35 +00:00
Mario Rodas 7e99e0f339
Merge pull request #115404 from r-ryantm/auto-update/gmsh 
gmsh: 4.7.1 -> 4.8.0
 2021-03-08 19:45:08 -05:00
Frederik Rietdijk 277d488026 Merge staging into staging-next 2021-03-08 19:20:18 +01:00
R. RyanTM 435eaafaf1 gmsh: 4.7.1 -> 4.8.0 2021-03-08 11:54:52 +00:00
Sandro Jäckel 0207c32eff
giac: remove ? null 2021-03-08 02:01:15 +01:00
Sandro Jäckel b7befb3522
palp: format 2021-03-08 02:01:15 +01:00
github-actions[bot] 65cddb74d7
Merge staging-next into staging 2021-03-07 06:17:25 +00:00
Mauricio Collares ef615b5a61 sage: adapt for eclib output format changes 2021-03-06 12:28:52 -03:00
Jan Tojnar 6d1958ad2d
Merge branch 'staging-next' into staging 2021-03-04 22:16:45 +01:00
Sandro Jäckel 086e9e0978
R: switch to pname + version 2021-03-04 03:47:33 +01:00
github-actions[bot] e8162c62e3
Merge staging-next into staging 2021-02-27 00:37:54 +00:00
Vijay Lulla 2c9d7ee369 R: 4.0.3 -> 4.0.4 2021-02-26 22:42:21 +00:00
github-actions[bot] ec3729e487
Merge staging-next into staging 2021-02-26 18:16:46 +00:00
Timo Kaufmann be504fc82a
Merge pull request #113603 from collares/sage-test-fixes 
sage: disable intermittent test and fix threejs breakage
 2021-02-26 13:27:44 +00:00
Robert Schütz 54757b35c1 Merge branch 'staging-next' into staging 2021-02-26 10:56:17 +01:00
Frederik Rietdijk c456a2512f Merge master into staging-next 2021-02-26 10:25:13 +01:00
Mauricio Collares 4718aea896 sage: use slightly more robust way of getting threejs version 2021-02-25 22:31:27 -03:00
Mauricio Collares 7efa803a4b sage: disable intermittent test 2021-02-25 22:31:27 -03:00
Sandro ad06c82b9c
Merge pull request #113965 from SuperSandro2000/fix-collection17 2021-02-23 08:44:14 +01:00
Fabian Affolter a3343fc6b9 calc: specify license 2021-02-22 14:21:33 -05:00
github-actions[bot] ed07c63105
Merge staging-next into staging 2021-02-22 06:17:08 +00:00
github-actions[bot] 227aa2c9b0
Merge master into staging-next 2021-02-22 06:17:05 +00:00
Thomas Bereknyei d3833fbe25 calc: nixpkgs-review fixes 2021-02-22 00:56:59 -05:00
R. RyanTM 840822c280 calc: 2.12.8.1 -> 2.12.8.2 2021-02-22 00:56:59 -05:00
Sandro Jäckel dcc2d18867
nasc: remove unused input 2021-02-22 02:27:56 +01:00
Ben Siraphob 127733211e
treewide: unzip buildInputs to nativeBuildInputs (#112302) 2021-02-20 16:01:53 -05:00
Robert T. McGibbon 40062e431b cbc: 2.10.3 -> 2.10.4 2021-02-20 15:41:18 -05:00
github-actions[bot] abe7db36a4
Merge staging-next into staging 2021-02-20 00:36:40 +00:00
Sandro 41edfe8c20
Merge pull request #113295 from siraben/cc-eq-cc 2021-02-19 19:25:41 +01:00
github-actions[bot] daab056dd9
Merge staging-next into staging 2021-02-19 18:16:58 +00:00
Ben Siraphob 223f25cf4a treewide: add targetPrefix to hardcoded references to CC=cc 2021-02-20 01:01:46 +07:00
AndersonTorres 111256a480 dap: init at 3.10 2021-02-19 10:24:24 -03:00
Ben Siraphob e03c068af5 treewide: makeWrapper buildInputs to nativeBuildInputs 2021-02-19 20:09:16 +07:00
R. RyanTM 71e52071fc calc: 2.12.7.6 -> 2.12.8.1 2021-02-18 06:00:33 +00:00
idontgetoutmuch 5eabb050be
R: fix dylib install_name (#113002) 
Co-authored-by: zseri <zseri.devel@ytrizja.de>
Co-authored-by: Sandro <sandro.jaeckel@gmail.com>
 2021-02-15 03:08:02 +01:00
R. RyanTM 390c686021 calc: 2.12.7.2 -> 2.12.7.6 2021-02-06 08:43:11 +00:00
Lucas Ransan c0726b30b6
rofi-calc: 1.9 -> 2.0.0 2021-02-04 13:40:34 +01:00
Sandro Jäckel ced3ec6ce3
treewide: update permanent url redirects 2021-01-30 21:48:57 +01:00
R. RyanTM af91d02593 gretl: 2020e -> 2021a 2021-01-30 01:29:56 +00:00
Sandro d17f76f05a
Merge pull request #108172 from sikmir/geogebra 
geogebra: 5-0-609-0 → 5-0-620-0, geogebra6: 6-0-609-0 → 6-0-620-0
 2021-01-29 02:19:06 +01:00
Pavol Rusnak a6ce00c50c
treewide: remove stdenv where not needed 2021-01-25 18:31:47 +01:00
Sandro a36bf6faf9
Merge pull request #101796 from luc65r/pkg/tilp2 2021-01-25 01:11:50 +01:00
luc65r 3c5f402e6e
tilp2: init at 1.18 2021-01-24 14:06:41 +01:00
luc65r 99d0610e03
gfm: init at 1.08 2021-01-24 14:06:41 +01:00
volth bc0d605cf1 treewide: fix double quoted strings in meta.description 
Signed-off-by: Ben Siraphob <bensiraphob@gmail.com>
 2021-01-24 19:56:59 +07:00
Markus Kowalewski 6dba41fbcb
mpi: use mpi attribute consistently as the default MPI implementations 
Use the attribute mpi to provide a system wide default MPI
implementation. The default is openmpi (as before).
This now allows for overriding the MPI implentation by using
the overlay mechanism. Build all packages with mpich instead
of the default openmpi can now be achived like this:
self: super:
 {
   mpi = super.mpich;
 }

All derivations that have been using "mpi ? null" to provide optional
building with MPI have been change in the following way to allow for
optional builds with MPI:
{ ...
, mpi
, useMpi ? false
}
 2021-01-23 12:15:13 +01:00
Jonathan Ringer 9bb3fccb5b treewide: pkgs.pkgconfig -> pkgs.pkg-config, move pkgconfig to alias.nix 
continuation of #109595

pkgconfig was aliased in 2018, however, it remained in
all-packages.nix due to its wide usage. This cleans
up the remaining references to pkgs.pkgsconfig and
moves the entry to aliases.nix.

python3Packages.pkgconfig remained unchanged because
it's the canonical name of the upstream package
on pypi.
 2021-01-19 01:16:25 -08:00
Ben Siraphob badf51221d treewide: stdenv.lib -> lib 2021-01-16 17:58:11 +07:00
Sandro Jäckel 55444ed07f
nasc: Fix compilation with gcc10 2021-01-11 12:08:20 +01:00
Profpatsch 4a7f99d55d treewide: with stdenv.lib; in meta -> with lib; 
Part of: https://github.com/NixOS/nixpkgs/issues/108938

meta = with stdenv.lib;

is a widely used pattern. We want to slowly remove
the `stdenv.lib` indirection and encourage people
to use `lib` directly. Thus let’s start with the meta
field.

This used a rewriting script to mostly automatically
replace all occurances of this pattern, and add the
`lib` argument to the package header if it doesn’t
exist yet.

The script in its current form is available at
https://cs.tvl.fyi/depot@2f807d7f141068d2d60676a89213eaa5353ca6e0/-/blob/users/Profpatsch/nixpkgs-rewriter/default.nix
 2021-01-11 10:38:22 +01:00
Nikolay Korotkiy c0575fe0ef
geogebra: 5-0-609-0 → 5-0-620-0, geogebra6: 6-0-609-0 → 6-0-620-0 2021-01-10 20:19:43 +03:00
github-actions[bot] ecebf82121
Merge master into staging-next 2021-01-08 12:29:36 +00:00
Dyazz 8cdefb6995 qalculate-gtk: 3.15.0 -> 3.16.0 2021-01-08 08:43:39 +01:00
Jan Tojnar f19eb635b4
Merge branch 'master' into staging-next 
b04fc593e7 seems to have accidentally changed mkDerivation function for dfilemanager and solarus-quest-editor so I have reverted that here.
 2021-01-07 13:04:31 +01:00
Сухарик 4746e1717f
sympy: 1.6.2 -> 1.7.1 (#107663) 
* sympy: 1.6.2 -> 1.7.1

* sage: adapt tests to sympy 1.7

Co-authored-by: Mauricio Collares <mauricio@collares.org>
 2021-01-06 17:10:30 +00:00
Ben Siraphob 3ae5e6ce03 treewide: remove enableParallelBuilding = true if using cmake 2021-01-03 18:37:40 +07:00
Maximilian Bosch e7d1be840c
treewide: remove maintainership of ma27 from a few packages 
Those are packages I don't use anymore for a longer time and I therefore
don't think that listing me as maintainer is a good idea. If those
should be removed now, I'd be fine with that.

SuperSandro2000 will take care of a few packages[1].

[1] https://github.com/NixOS/nixpkgs/pull/108126#pullrequestreview-560599381
 2021-01-01 19:48:01 +01:00
Pavol Rusnak 1017eb06b1
Merge pull request #101227 from herberteuler/fix/mathematica-12.1.1-opencv4 
mathematica: use opencv4
 2020-12-29 23:41:09 +01:00
freezeboy 3c89e637e8 bcal: 1.9 -> 2.2 2020-12-27 17:52:28 +01:00
FliegendeWurst e49c1a0027
mathematica: 12.1.1 -> 12.2.0 (#107309) 2020-12-21 12:55:28 -05:00
Mauricio Collares 8100c5a44b sage: 8.9 -> 9.2 fixups 2020-12-15 16:51:42 -03:00
Mauricio Collares 8b8cae779f pari: update tarball location, since it moved 2020-12-15 16:46:43 -03:00
Mauricio Collares 4058e45736 nauty: update tarball sha256 
The old `nauty` tarball is currently accessible at
https://distfiles.macports.org/nauty/nauty27r1.tar.gz. The diff is a
single line in genbg.c:

-    SUMMARY(&nout,t2-t1);
+    SUMMARY(nout,t2-t1);
 2020-12-15 16:46:43 -03:00
Mauricio Collares cf6364bed2 pynac: import patch to avoid deprecation warnings on python3.8 2020-12-14 19:24:19 -03:00
Mauricio Collares 5df948d4cc giac: 1.5.0-21 -> 1.5.0-87 2020-12-14 19:24:18 -03:00
Masanori Ogino 5c4136daf7 sage: 8.9 -> 9.2 2020-12-14 19:24:18 -03:00
Sandro 30cdc8be48
Merge pull request #105650 from r-ryantm/auto-update/gretl 
gretl: 2020b -> 2020e
 2020-12-02 20:22:27 +01:00
R. RyanTM cf89444f1e gmsh: 4.7.0 -> 4.7.1 2020-12-02 05:50:47 +00:00
R. RyanTM f9a694106b gretl: 2020b -> 2020e 2020-12-02 04:45:07 +00:00
Sandro 2c0389680c
Merge pull request #90075 from dmrauh/add/gretl 
gretl: init at 2020b
 2020-11-28 22:10:05 +01:00
Dominik Michael Rauh 5f10cd5e0b
gretl: init at 2020b 2020-11-28 21:37:30 +01:00
Sandro ec421ca248
Merge pull request #100532 from piegamesde/fix-desktopitems 
treewide: Fix broken desktop files and mark packages as broken
 2020-11-27 22:27:59 +01:00
Sandro b08b773f24
Merge pull request #101807 from cheriimoya/pspp 
pspp 1.2.0 -> 1.4.1
 2020-11-27 00:35:16 +01:00
Gabriel Ebner 56ffa7a9e4
Merge pull request #105055 from r-ryantm/auto-update/qalculate-gtk 
qalculate-gtk: 3.14.0 -> 3.15.0
 2020-11-26 19:04:24 +01:00
R. RyanTM 8c1f644cc7 qalculate-gtk: 3.14.0 -> 3.15.0 2020-11-26 17:48:20 +00:00
Graham Christensen bc49a0815a
utillinux: rename to util-linux 2020-11-24 12:42:06 -05:00
Sandro b3f5ff2005
Merge pull request #103703 from r-ryantm/auto-update/gmsh 
gmsh: 4.6.0 -> 4.7.0
 2020-11-24 01:57:36 +01:00
Martin Lavoie 30afa507a3 pynac: use python3 instead of python2 2020-11-20 20:46:43 +01:00
Ben Gamari 7263f7c433
mathematica: Prefer building locally (#100856) 
There is little benefit to copying a 4GB tarball over the network,
just to perform an I/O-bound operation and then copy the
multi-gigabyte result back.
 2020-11-19 19:42:22 -05:00
Timo Kaufmann b7319d2d35 maintainers: add raskin to the sage team 
https://github.com/NixOS/nixpkgs/pull/104083#issuecomment-729168625
 2020-11-18 21:29:24 +01:00
Timo Kaufmann ff8338343b maintainers: create sage team 
Maintaining all the packages whose updates might break some aspect of
sage.

For reference:
https://github.com/NixOS/nixpkgs/pull/103810#issuecomment-727536510
 2020-11-18 21:27:37 +01:00
R. RyanTM 3457f85820 gp2c: 0.0.11pl4 -> 0.0.12 2020-11-13 14:37:53 +00:00
R. RyanTM a36f37b778 gmsh: 4.6.0 -> 4.7.0 2020-11-13 14:19:59 +00:00
R. RyanTM 3664e4929f qalculate-gtk: 3.13.0 -> 3.14.0 2020-11-10 01:49:59 +00:00
Masanori Ogino 88de0d7354
maxima: 5.42.2 -> 5.44.0 (#102861) 
Reference: https://sourceforge.net/p/maxima/code/ci/master/tree/ChangeLog-5.43.md
Reference: https://sourceforge.net/p/maxima/code/ci/master/tree/ChangeLog-5.44.md
Signed-off-by: Masanori Ogino <167209+omasanori@users.noreply.github.com>
 2020-11-08 19:29:53 -05:00
R. RyanTM 036cec187c ginac: 1.7.9 -> 1.8.0 2020-11-01 17:19:05 -08:00
Maximilian Bosch 952dc5c7ff
Merge pull request #101421 from sikmir/geogebra 
geogebra: 5-0-593-0 -> 5-0-609-0, geogebra6: 6-0-600-0 -> 6-0-609-0
 2020-10-30 23:39:37 +01:00
Ben Siraphob db74029e3e treewide: remove package names from prefix of descriptions 2020-10-27 09:15:07 -07:00
Max Hausch 8fb91897f4
pspp 1.2.0 -> 1.4.1 2020-10-27 01:10:37 +01:00
Masanori Ogino 40fb3ed6dc maxima: remove 5.41.0 
It had been kept for SageMath, but it uses the default version nowadays
and this version is not referenced in nixpkgs.

Signed-off-by: Masanori Ogino <167209+omasanori@users.noreply.github.com>
 2020-10-27 06:09:12 +09:00
Maximilian Bosch 61fa498994
Merge pull request #101646 from luc65r/pkg/rofi-calc 
rofi-calc: 1.8 -> 1.9
 2020-10-26 16:36:43 +01:00
Peter Simons 40bc6c8dad
Merge pull request #100393 from matthiasbeyer/update-r 
R: 4.0.2 -> 4.0.3
 2020-10-25 21:57:03 +01:00
Lucas Ransan 2436e41916 rofi-calc: 1.8 -> 1.9 2020-10-25 14:31:57 +01:00
Nikolay Korotkiy a2472ebfb1
geogebra: 5-0-593-0 -> 5-0-609-0, geogebra6: 6-0-600-0 -> 6-0-609-0 2020-10-23 19:25:11 +03:00
Guanpeng Xu efe94c085b mathematica: use opencv4 
The default opencv2 is marked broken at 5e68d203, and it is suggested
there that the current release is 4.x.
 2020-10-21 08:36:54 +08:00
Masanori Ogino 096ef94717 gfan: fix build failures with cddlib v0.94l 
It fixes https://github.com/NixOS/nixpkgs/issues/100622.

Signed-off-by: Masanori Ogino <167209+omasanori@users.noreply.github.com>
 2020-10-19 10:29:01 +09:00
Ben Siraphob 683a87dbeb treewide: remove periods from end of package descriptions 2020-10-17 08:22:31 -07:00
piegames e14a359896 treewide: Fix broken desktop files and mark packages as broken 
This fixes all packages that are failed `nixpkgs-review` in #91790.
Packages that were broken prior to that PR were marked as broken.
Packages that failed because of #75729 were fixed.
 2020-10-15 15:14:51 +02:00
Matthias Beyer ea4a13e573 R: 4.0.2 -> 4.0.3 
Signed-off-by: Matthias Beyer <mail@beyermatthias.de>
 2020-10-13 10:05:15 +02:00
AndersonTorres 1331d642e0 zegrapher: init at 3.1.1 2020-10-12 19:31:34 -03:00
AndersonTorres 69c14beb04 gp2c: 0.0.11pl3 -> 0.0.11pl4 2020-10-12 04:07:03 -03:00
AndersonTorres 781753db45 pari: 2.11.3 -> 2.11.4 2020-10-12 04:07:03 -03:00
Wulfsta 77143fc628 mathematica: fix libQt errors 2020-10-11 15:49:11 +02:00
Gabriel Ebner 9fadca2bcc qalculate-gtk: 3.12.1 -> 3.13.0 2020-10-04 14:53:10 +02:00
Gabriel Ebner 1c576d0b37 sage: use jdk8 2020-09-19 14:22:43 +02:00
freezeboy 3fc3fd14cf lp_solve: fix buildCommand some binaries moved 2020-09-13 03:51:51 +02:00
voidless 721da4b5e2 geogebra6: 6-0-598-0 -> 6-0-600-0 2020-09-04 11:49:44 +02:00
John Ericson 1965a241fc
Merge pull request #61019 from volth/gcc.arch-amd 
platform.gcc.arch: support for AMD CPUs
 2020-09-01 22:31:16 -04:00
worldofpeace 20252b3cb6 nasc: typo 2020-08-31 13:53:25 -04:00
worldofpeace 32a9e0eea7 nasc: 0.5.4 -> 0.7.5 
* updates to meson build system
* adapt to complications around libqalculate
* update metadata
* add update script
 2020-08-31 13:50:43 -04:00
R. RyanTM 43114a1751 wxmaxima: 20.04.0 -> 20.06.6 2020-08-31 17:09:33 +02:00
R. RyanTM 73cff3d2c2 R: 4.0.0 -> 4.0.2 2020-08-31 16:57:06 +02:00
R. RyanTM 741b7f7b36 rofi-calc: 1.7 -> 1.8 2020-08-29 06:44:34 +00:00
Henri Menke e1f177fab2
mathematica: 12.1.0 -> 12.1.1 2020-08-24 11:36:59 +12:00
Gabriel Ebner 294ddd8e9f qalculate-gtk: explain pkg-config issue 2020-08-23 11:13:06 +02:00
Gabriel Ebner a3ce3f5931 qalculate-gtk: fix parallel build 2020-08-22 19:06:43 +02:00
Gabriel Ebner 55af730da0
Merge pull request #95999 from gebner/calculix217 
calculix: 2.15 -> 2.17
 2020-08-22 18:26:02 +02:00
Gabriel Ebner 294cd72be3 qalculate-gtk: 3.8.0a -> 3.12.1 2020-08-22 17:14:25 +02:00
Gabriel Ebner 214d7626e1 calculix: 2.15 -> 2.17 2020-08-22 17:12:30 +02:00
voidIess 3cc44ba04e
geogebra 6 : init at 6-0-598-0 (#95422) 
* geogebra 6 : init at 6-0-598-0

since geogebra was ported from java to electron, this is a repacke;
wont want to delete geogebra 5, no darwin package for 6

ran nixpkgs-fmt over the file to cleanly reformat the spacings

Update pkgs/top-level/all-packages.nix

remove a trailing space

Co-authored-by: Tom Smeets <Tom.TSmeets@Gmail.com>

Update pkgs/applications/science/math/geogebra/geogebra_6.nix

Co-authored-by: Tom Smeets <Tom.TSmeets@Gmail.com>

Applied a sugestion for the formating of the lines

fixed a mistake, where the wrong name attribute was used

removed an unnecassary chmod statement

added a downlod link to archive.org

moved geogebra_6.nix to geogebra6.nix

removed unnecesary build inputs statement

* renamed to geogebra6
 2020-08-16 20:02:54 +02:00
volth cf7b63df5b gcc.arch: refactor, move tables under lib/ 2020-08-05 11:18:26 +00:00
Stephen Morgan d9e6338fec geogebra: 5-0-574-0 -> 5-0-593-0 2020-07-24 15:11:42 +10:00
Alyssa Ross 8f5eaa6deb
gfan: fix clang build on non-Darwin 
-fno-guess-branch-probability isn't a Darwin-specific thing, it's a
clang-specific thing.
 2020-07-17 15:30:24 +00:00
R. RyanTM d27df249ee yacas: 1.8.0 -> 1.9.1 2020-07-08 18:25:49 +00:00
R. RyanTM 97c089f2f7 gmsh: 4.5.6 -> 4.6.0 2020-07-03 11:56:48 +00:00
Markus Kowalewski 52f9aebe64
qalculate-gtk: add license 2020-06-27 00:37:44 +02:00
Frederik Rietdijk 08900c0554 Merge master into staging-next 2020-06-04 15:25:54 +02:00
Timo Kaufmann 374016fb1c
Merge pull request #89111 from timokau/gap-cleanup 
gap: cleanup
 2020-06-02 10:55:46 +02:00
Jonathan Ringer 3a4fec8232 mxnet: use blas.provider, fix build 2020-05-28 15:08:47 -07:00
Timo Kaufmann 6579f814cf gap: remove explicit configreFlags 
System gmp is now the default.
 2020-05-28 16:07:38 +02:00
Timo Kaufmann d689f3fe72 gap: add readline support 
Technically optional but strongly recommended from upstream. Replaces
their own implementation for input parsing.
 2020-05-28 16:06:34 +02:00
Timo Kaufmann f15c816584 gap: use https for the homepage 2020-05-28 15:58:41 +02:00
Timo Kaufmann 9e245a0878 gap: fix comment typo 2020-05-28 15:57:50 +02:00
Timo Kaufmann e2e45e163c gap: remove m4 dependency 
No longer necessary, since the build system was significantly overhauled
/ replaced by Max Horn.
 2020-05-28 15:55:07 +02:00
Timo Kaufmann c269b51c38 gap: move to new source URL 
GAP downloads moved to a new subdomain. The old one still redirects, but
the new one is the "source of truth" so we should switch to that.
 2020-05-28 15:53:56 +02:00
Timo Kaufmann a4c76b970c gap: use the check target for install checks 
As suggested by Max Horn.

This exists since gap 4.10 and will only run the install checks once
while also exiting with an appropriate exit code. This new check has
uncovered some test failures, which are harmless and actually disabled
in a future gap release. The error-detection code for the previous test
target was probably broken.
 2020-05-28 15:50:46 +02:00
Timo Kaufmann b74991703a palp: fix hash 
The file was modified for the second time now. I'll try to contact
upstream about this. Maybe 2.11 is not actually a finished product yet.
 2020-05-28 00:20:30 +02:00
Mario Rodas d30b7592c4
Merge pull request #88363 from r-ryantm/auto-update/clp 
clp: 1.17.5 -> 1.17.6
 2020-05-23 00:31:57 -05:00
Timo Kaufmann b811d52b9c
Merge pull request #88428 from timokau/nauty-27r1 
nauty: 26r12 -> 27r1
 2020-05-20 13:22:15 +00:00
Timo Kaufmann d0e171395a nauty: 26r12 -> 27r1 
Changes: http://pallini.di.uniroma1.it/changes24-27.txt
 2020-05-20 14:59:46 +02:00
Timo Kaufmann a276c4485c nauty: add meta.changelog 2020-05-20 14:59:46 +02:00
R. RyanTM d1b7e3f8cc clp: 1.17.5 -> 1.17.6 2020-05-20 10:04:01 +00:00
Timo Kaufmann aae9af9632 palp: fix hash 
It looks like the upstream tarball was changed since I updated palp 3
days ago. Hopefully that won't happen again.
 2020-05-19 17:50:43 +02:00
Timo Kaufmann d65850e975 palp: 2.1 -> 2.11 
According to the homepage[1]:

> Small change in Mori.h for compatibility with gcc_10 (thanks to J.
  Puydt) [May 15, 2020].

Disabling the strictoverflow seems to be no longer necessary (I'm
relying on the check phase here).

[1] http://hep.itp.tuwien.ac.at/~kreuzer/CY/CYpalp.html
 2020-05-16 15:07:57 +02:00
Timo Kaufmann 51de320353 palp: add meta.changelog 2020-05-16 15:05:45 +02:00
R. RyanTM e07dfd38f1 wxmaxima: 20.02.4 -> 20.04.0 2020-05-12 22:12:53 -07:00
albakham 0c0f353d62 rofi-calc: 1.6 -> 1.7 2020-05-08 22:12:49 -04:00
Doron Behar 53effac040 mathematica: explicitly use opencv2 2020-05-05 13:48:55 +03:00
R. RyanTM a930faab93 mxnet: 1.4.1 -> 1.6.0 2020-05-02 10:17:38 +02:00
Timo Kaufmann 7866440f12
Merge pull request #86274 from samlich/sage-matrix-double-dense 
sage: fix doctest matrix_double_dense is_unitary
 2020-05-01 22:12:10 +00:00
Peter Simons 205e4dffd5
Merge pull request #86081 from jabranham/update-r 
R: 3.6.3 --> 4.0.0 & update packages
 2020-05-01 20:25:14 +02:00
samlich c0bd938e5c
sage: fix doctest matrix_double_dense is_unitary 2020-05-01 16:04:23 +00:00
Jan Tojnar e89e2edc73
libusb-compat-0_1: rename from libusb 2020-04-28 05:33:41 +02:00
Alex Branham 8ce6552d64
R: 3.6.3 -> 4.0.0 2020-04-26 17:06:07 -04:00
Matthew Bauer ff2f2644f8 blas,lapack: use isILP64 instead of is64bit 
This is a better name since we have multiple 64-bit things that could
be referred to.

LP64  : integer=32, long=64, pointer=64
ILP64 : integer=64, long=64, pointer=64
 2020-04-20 16:02:43 -05:00
Matthew Bauer 97fc083fd4 giac: broken on 64-bit blas 2020-04-17 16:24:31 -05:00
Matthew Bauer 1c8aba8334 treewide: use blas and lapack 
This makes packages use lapack and blas, which can wrap different
BLAS/LAPACK implementations.

treewide: cleanup from blas/lapack changes

A few issues in the original treewide:

- can’t assume blas64 is a bool
- unused commented code
 2020-04-17 16:24:09 -05:00
worldofpeace 433ea74af1 nasc: fix build 2020-04-15 17:19:47 -04:00
AndersonTorres 3b91c3de8f gp2c: 0.0.11pl2 -> 0.0.11pl3 2020-04-15 00:45:28 -03:00
Benjamin Hipple 17a1bf5dbd
Merge pull request #85069 from r-ryantm/auto-update/ginac 
ginac: 1.7.8 -> 1.7.9
 2020-04-12 11:18:43 -04:00
R. RyanTM 9b5aad0644 ginac: 1.7.8 -> 1.7.9 2020-04-12 12:04:38 +00:00
Michael Reilly 84cf00f980
treewide: Per RFC45, remove all unquoted URLs 2020-04-10 17:54:53 +01:00
Timo Kaufmann b72fd98789
Merge pull request #84666 from jonringer/repofy-palp 
palp: correct metadata for repology
 2020-04-08 11:44:33 +00:00
Gabriel Ebner e71c0d80a1
Merge pull request #84583 from r-ryantm/auto-update/qalculate-gtk 
qalculate-gtk: 3.8.0 -> 3.8.0a
 2020-04-08 11:01:33 +02:00
Jonathan Ringer f89b76d9db
palp: correct metadata for repology 2020-04-07 14:08:03 -07:00
R. RyanTM 67ea5a0081 qalculate-gtk: 3.8.0 -> 3.8.0a 2020-04-07 10:29:32 +00:00
R. RyanTM b43965986f gmsh: 4.5.4 -> 4.5.6 2020-04-05 19:28:16 +00:00
Timo Kaufmann 83fd89945d
Merge pull request #79661 from luc65r/pkg/cemu 
cemu: init at 1.3
 2020-03-31 15:17:33 +00:00
luc65r 8edd400bfb
rofi-calc: init at 1.6 (#83136) 
Also:
* maintainers: add albakhamj
* maintainers: add luc65r
* rofi: add plugins argument to wrapper

Co-authored-by: Maciej Krüger <mkg20001@gmail.com>
 2020-03-30 01:18:56 +02:00
Guanpeng Xu d2702c915f mathematica: 12.0.0 -> 12.1.0 2020-03-29 14:38:33 +02:00
Frederik Rietdijk 5175c35a99
Merge pull request #81611 from r-ryantm/auto-update/R 
R: 3.6.2 -> 3.6.3
 2020-03-14 14:29:05 +01:00
wucke13 c24b9a57c4 getdp: 3.0.4 -> 3.3.0 2020-03-13 04:10:20 +00:00
Maximilian Bosch 76821e6f43
geogebra: 5-0-573-0 -> 5-0-574-0 2020-03-12 18:12:57 +01:00
Timo Kaufmann ba589e24c9 sage: patch for pari 2.11.3 2020-03-12 12:24:41 +01:00
Timo Kaufmann c4ab541443 pari: backport bug fix 
https://trac.sagemath.org/ticket/29313#comment:4
 2020-03-12 12:24:35 +01:00
xaverdh 5ac085c3cc
wxmaxima: 18.02.0 -> 20.02.4 (#82323) 
The commit description is 18.02.0 -> 20.02.4, because in the last version bump (1c6a193b3e), the version string was changed, but the hash was not.

Co-authored-by: Dmitry Kalinkin <dmitry.kalinkin@gmail.com>
 2020-03-11 12:07:53 -04:00
Timo Kaufmann 1a6b1fb32a symmetrica: add timokau to maintainers 2020-03-10 18:10:28 +01:00
Timo Kaufmann 0c875c28c6 symmetrica: 2.0 -> 3.0.1 
This switches to the sagemath fork, since the original upstream is no
longer maintained and sagemath has effectively maintained symmetrica
through patches for a while now. The update fixes one bug in particular
that has caused failures in the sagemath test suite:

https://github.com/NixOS/nixpkgs/issues/81449
https://trac.sagemath.org/ticket/15312
https://trac.sagemath.org/ticket/29061

Regarding the licensing change:

7cf91b3800
 2020-03-10 18:10:25 +01:00
Timo Kaufmann e05e219b31
Merge pull request #82240 from timokau/sage-docutils-0.15-fix 
sage: fix test suite with docutils 0.15
 2020-03-10 15:25:22 +00:00
Timo Kaufmann 7133577405 sage: fix test suite with docutils 0.15 
The better way to fix this would be to backport the upstream sphinx
patch:

faedcc48cc

Unfortunately it doesn't apply cleanly and isn't worth the effort
of backporting. Let's hope we can switch to python3 sage and the recent
sphinx version that comes with it before this becomes a problem.
 2020-03-10 13:15:41 +01:00
Timo Kaufmann 63ed2bf3c3
Merge pull request #81950 from r-ryantm/auto-update/pari 
pari: 2.11.2 -> 2.11.3
 2020-03-09 17:31:14 +00:00
R. RyanTM e6f5bb8dc4 qalculate-gtk: 3.7.0 -> 3.8.0 2020-03-08 00:14:22 +00:00
R. RyanTM 6528554396 pari: 2.11.2 -> 2.11.3 2020-03-07 02:43:40 +00:00
R. RyanTM 9974067129 gmsh: 4.5.2 -> 4.5.4 2020-03-05 00:20:08 +00:00
R. RyanTM faa5c3bde3 R: 3.6.2 -> 3.6.3 2020-03-03 11:34:22 +00:00
Timo Kaufmann f4dbf4402b
Merge pull request #80759 from Thra11/fix-r 
Fix R
 2020-02-23 23:48:21 +00:00
Tom Hall ae9e09a2e1 R: fix build on aarch64 by removing a failing test 
I believe this test is currently incorrect on aarch64 and expects a
warning about loss of precision with much smaller numbers than the
platform's long doubles can handle.
 2020-02-22 13:17:40 +00:00