forked from mirrors/nixpkgs
ncbiCToolsc: remove
Don't build and have been abandoned for years
This commit is contained in:
parent
2ac5b56135
commit
eff97ce7fd
|
@ -1,54 +0,0 @@
|
|||
a @ { tcsh, mesa, lesstif, libX11, libXaw, xproto, libXt, libSM, libICE, libXmu, libXext, ... }:
|
||||
let
|
||||
fetchurl = a.fetchurl;
|
||||
|
||||
version = "20090809";
|
||||
buildInputs = with a; [
|
||||
tcsh libX11 libXaw lesstif xproto mesa libXt
|
||||
libSM libICE libXmu libXext
|
||||
];
|
||||
in
|
||||
rec {
|
||||
src = fetchurl {
|
||||
url = "ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tools/old/${version}/ncbi.tar.gz";
|
||||
sha256 = "05bbnqk6ffvhi556fsabcippzq2zrkynbk09qblzvfzip9hlk1qc";
|
||||
};
|
||||
|
||||
inherit buildInputs;
|
||||
configureFlags = [];
|
||||
|
||||
/* doConfigure should be removed if not needed */
|
||||
phaseNames = ["preBuild" "build" "deploy"];
|
||||
|
||||
preBuild = a.fullDepEntry (''
|
||||
sed -e 's@#!/bin/csh@#! ${a.tcsh}/bin/csh@' -i $(fgrep '#!/bin/csh' -rl build make)
|
||||
sed -e '/set path/d' -i make/ln-if-absent
|
||||
sed -e 's@/usr/include @${a.lesstif}/include ${a.mesa}/include @' -i make/makedis.csh
|
||||
sed -e 's@/usr/[a-zA-Z0-9]*/include @@g; s@/usr/include/[a-zA-Z0-9/] @@g' -i make/makedis.csh
|
||||
cd ..
|
||||
'') ["doUnpack" "minInit"];
|
||||
|
||||
build = a.fullDepEntry (''
|
||||
./ncbi/make/makedis.csh
|
||||
'') ["preBuild" "addInputs"];
|
||||
|
||||
deploy = a.fullDepEntry (''
|
||||
mkdir -p $out/bin $out/lib $out/include $out/source $out/share/${name}/build-snapshot
|
||||
cd ncbi/build
|
||||
cp *.o *.so $out/lib
|
||||
cp -r . $out/share/${name}/build-snapshot
|
||||
cp ../make/makedis.csh $out/share/${name}/build-snapshot
|
||||
cp *.h $out/include
|
||||
cp *.c *.h $out/source
|
||||
find . -perm -0100 -a '(' '(' ! -name '*.*' ')' -o '(' -name '*.REAL' ')' ')' -exec cp '{}' $out/bin ';'
|
||||
'') ["defEnsureDir" "build" "minInit"];
|
||||
|
||||
name = "NCBI-Toolbox-" + version;
|
||||
meta = {
|
||||
description = "NCBI general-purpose portable toolkit";
|
||||
maintainers = [
|
||||
a.lib.maintainers.raskin
|
||||
];
|
||||
#platforms = a.lib.platforms.linux ;
|
||||
};
|
||||
}
|
|
@ -14929,8 +14929,6 @@ let
|
|||
|
||||
mrbayes = callPackage ../applications/science/biology/mrbayes { };
|
||||
|
||||
ncbiCTools = builderDefsPackage (callPackage ../development/libraries/ncbi) {};
|
||||
|
||||
ncbi_tools = callPackage ../applications/science/biology/ncbi-tools { };
|
||||
|
||||
paml = callPackage ../applications/science/biology/paml { };
|
||||
|
|
Loading…
Reference in a new issue