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Added meta.pkgMaintainer to biology packages - a claim to fame, or

Browse source 
you know who to blame!

svn path=/nixpkgs/trunk/; revision=12986
This commit is contained in:
Pjotr Prins 2008-10-07 15:12:01 +00:00
parent 4ab58fc7f3
commit b3aa5d6bfc
7 changed files with 9 additions and 2 deletions
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1
pkgs/applications/science/biology/emboss/default.nix
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@ -26,5 +26,6 @@ stdenv.mkDerivation {
sequence data from the web.'';
license = "GPL2";
homepage = http://emboss.sourceforge.net/;
pkgMaintainer = http://biolib.open-bio.org/;
};
}

1
pkgs/applications/science/biology/mrbayes/default.nix
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@ -16,5 +16,6 @@ stdenv.mkDerivation rec {
longDescription = ''Bayesian inference of phylogeny is based upon a quantity called the posterior probability distribution of trees, which is the probability of a tree conditioned on the observations. The conditioning is accomplished using Bayes's theorem. The posterior probability distribution of trees is impossible to calculate analytically; instead, MrBayes uses a simulation technique called Markov chain Monte Carlo (or MCMC) to approximate the posterior probabilities of trees.'';
license = "GPL2";
homepage = http://mrbayes.csit.fsu.edu/;
pkgMaintainer = http://biolib.open-bio.org;
};
}

1
pkgs/applications/science/biology/ncbi-tools/default.nix
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@ -17,6 +17,7 @@ stdenv.mkDerivation rec {
description = ''NCBI Bioinformatics toolbox (incl. blast)'';
longDescription = ''The NCBI Bioinformatics toolsbox, including command-line utilties, libraries and include files. No X11 support (at this point).'';
homepage = http://www.ncbi.nlm.nih.gov/IEB/ToolBox/;
pkgMaintainer = http://BioLib.open-bio.org/;
license = "GPL";
priority = "5"; # zlib.so gives a conflict with zlib
};

2
pkgs/applications/science/biology/pal2nal/default.nix
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@ -26,6 +26,6 @@ If the input is a pair of sequences, PAL2NAL automatically calculates KS and KA
'';
license = "non-commercial";
homepage = http://coot.embl.de/pal2nal/;
pkgMaintainer = "Pjotr Prins";
pkgMaintainer = http://biolib.open-bio.org;
};
}

1
pkgs/applications/science/biology/paml/default.nix
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@ -28,5 +28,6 @@ stdenv.mkDerivation {
longDescription = ''PAML is a package of programs for phylogenetic analyses of DNA or protein sequences using maximum likelihood. It is maintained and distributed for academic use free of charge by Ziheng Yang. ANSI C source codes are distributed for UNIX/Linux/Mac OSX, and executables are provided for MS Windows. PAML is not good for tree making. It may be used to estimate parameters and test hypotheses to study the evolutionary process, when you have reconstructed trees using other programs such as PAUP*, PHYLIP, MOLPHY, PhyML, RaxML, etc.'';
license = "non-commercial";
homepage = http://abacus.gene.ucl.ac.uk/software/paml.html;
pkgMaintainer = http://biolib.open-bio.org/;
};
}

4
pkgs/applications/science/biology/slr/default.nix
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@ -19,11 +19,13 @@ stdenv.mkDerivation {
'';
meta = {
description = "Phylogenetic Analysis by Maximum Likelihood (PAML)";
description = "SLR: Sitewise Likehood Ratio estimation of selection";
longDescription = ''
SLR is a program to detect sites in coding DNA that are unusually conserved and/or unusually variable (that is, evolving under purify or positive selection) by analysing the pattern of changes for an alignment of sequences on an evolutionary tree.
'';
license = "GPL3";
homepage = http://www.ebi.ac.uk/goldman/SLR/;
pkgMaintainer = http://biolib.open-bio.org/;
};
}

1
pkgs/development/libraries/science/biology/biolib/default.nix
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@ -17,5 +17,6 @@ written in C/C++ and makes them available for major Bio* languages: BioPerl,
BioRuby, BioPython'';
license = "GPL2";
homepage = http://biolib.open-bio.org/;
pkgMaintainer = http://biolib.open-bio.org/;
};
}