diff --git a/pkgs/servers/ldap/389/default.nix b/pkgs/servers/ldap/389/default.nix
index f2ed57b4eb7d..685d365ed185 100644
--- a/pkgs/servers/ldap/389/default.nix
+++ b/pkgs/servers/ldap/389/default.nix
@@ -2,14 +2,14 @@
 , svrcore, icu, net_snmp, kerberos, pcre, perlPackages
 }:
 let
-  version = "1.3.3.5";
+  version = "1.3.3.9";
 in
 stdenv.mkDerivation rec {
   name = "389-ds-base-${version}";
 
   src = fetchurl {
     url = "http://directory.fedoraproject.org/binaries/${name}.tar.bz2";
-    sha256 = "09w81salyr56njsvq9p96ijrrs0vwsczd43jf6384ylzj1jrxxl5";
+    sha256 = "1qqwv5j60f38hz4xpbzn4pixhkj07yjzbp7kz7cvfkgvdwy9jqxx";
   };
 
   buildInputs = [
@@ -19,7 +19,7 @@ stdenv.mkDerivation rec {
 
   # TODO: Fix bin/ds-logpipe.py, bin/logconv, bin/cl-dump
 
-  patches = [ ./no-etc.patch ./perl-path.patch ];
+  patches = [ ./perl-path.patch ];
 
   preConfigure = ''
     # Create perl paths for library imports in perl scripts
@@ -44,6 +44,11 @@ stdenv.mkDerivation rec {
     mkdir -p $out/lib/dirsrv
   '';
 
+  installFlags = [
+    "sysconfdir=\${out}/etc"
+    "localstatedir=\${TMPDIR}"
+  ];
+
   passthru.version = version;
 
   meta = with stdenv.lib; {
diff --git a/pkgs/servers/ldap/389/no-etc.patch b/pkgs/servers/ldap/389/no-etc.patch
deleted file mode 100644
index a894ffd40056..000000000000
--- a/pkgs/servers/ldap/389/no-etc.patch
+++ /dev/null
@@ -1,62 +0,0 @@
-From bcdd781b01beba59b9f6993355732070b9487603 Mon Sep 17 00:00:00 2001
-From: "William A. Kennington III" <william@wkennington.com>
-Date: Fri, 9 Jan 2015 14:51:46 -0800
-Subject: [PATCH 1/2] Makefile: Don't install files to /etc or /var
-
----
- Makefile.in | 17 ++++++++---------
- 1 file changed, 8 insertions(+), 9 deletions(-)
-
-diff --git a/Makefile.in b/Makefile.in
-index 24a9ddf..c97d1e1 100644
---- a/Makefile.in
-+++ b/Makefile.in
-@@ -169,15 +169,14 @@ am__uninstall_files_from_dir = { \
- am__installdirs = "$(DESTDIR)$(serverdir)" \
- 	"$(DESTDIR)$(serverplugindir)" "$(DESTDIR)$(bindir)" \
- 	"$(DESTDIR)$(sbindir)" "$(DESTDIR)$(bindir)" \
--	"$(DESTDIR)$(initdir)" "$(DESTDIR)$(sbindir)" \
-+	"$(DESTDIR)$(sbindir)" \
- 	"$(DESTDIR)$(taskdir)" "$(DESTDIR)$(updatedir)" \
- 	"$(DESTDIR)$(man1dir)" "$(DESTDIR)$(man8dir)" \
--	"$(DESTDIR)$(configdir)" "$(DESTDIR)$(infdir)" \
--	"$(DESTDIR)$(initconfigdir)" "$(DESTDIR)$(mibdir)" \
-+	"$(DESTDIR)$(infdir)" \
-+	"$(DESTDIR)$(mibdir)" \
- 	"$(DESTDIR)$(propertydir)" "$(DESTDIR)$(perldir)" \
- 	"$(DESTDIR)$(pkgconfigdir)" "$(DESTDIR)$(propertydir)" \
- 	"$(DESTDIR)$(pythondir)" "$(DESTDIR)$(sampledatadir)" \
--	"$(DESTDIR)$(schemadir)" "$(DESTDIR)$(systemdsystemunitdir)" \
- 	"$(DESTDIR)$(updatedir)" "$(DESTDIR)$(serverincdir)"
- LTLIBRARIES = $(server_LTLIBRARIES) $(serverplugin_LTLIBRARIES)
- am__DEPENDENCIES_1 =
-@@ -10207,7 +10206,7 @@ check: $(BUILT_SOURCES)
- all-am: Makefile $(LIBRARIES) $(LTLIBRARIES) $(PROGRAMS) $(SCRIPTS) \
- 		$(MANS) $(DATA) $(HEADERS) config.h
- installdirs:
--	for dir in "$(DESTDIR)$(serverdir)" "$(DESTDIR)$(serverplugindir)" "$(DESTDIR)$(bindir)" "$(DESTDIR)$(sbindir)" "$(DESTDIR)$(bindir)" "$(DESTDIR)$(initdir)" "$(DESTDIR)$(sbindir)" "$(DESTDIR)$(taskdir)" "$(DESTDIR)$(updatedir)" "$(DESTDIR)$(man1dir)" "$(DESTDIR)$(man8dir)" "$(DESTDIR)$(configdir)" "$(DESTDIR)$(infdir)" "$(DESTDIR)$(initconfigdir)" "$(DESTDIR)$(mibdir)" "$(DESTDIR)$(propertydir)" "$(DESTDIR)$(perldir)" "$(DESTDIR)$(pkgconfigdir)" "$(DESTDIR)$(propertydir)" "$(DESTDIR)$(pythondir)" "$(DESTDIR)$(sampledatadir)" "$(DESTDIR)$(schemadir)" "$(DESTDIR)$(systemdsystemunitdir)" "$(DESTDIR)$(updatedir)" "$(DESTDIR)$(serverincdir)"; do \
-+	for dir in "$(DESTDIR)$(serverdir)" "$(DESTDIR)$(serverplugindir)" "$(DESTDIR)$(bindir)" "$(DESTDIR)$(sbindir)" "$(DESTDIR)$(bindir)" "$(DESTDIR)$(sbindir)" "$(DESTDIR)$(taskdir)" "$(DESTDIR)$(updatedir)" "$(DESTDIR)$(man1dir)" "$(DESTDIR)$(man8dir)" "$(DESTDIR)$(infdir)" "$(DESTDIR)$(mibdir)" "$(DESTDIR)$(propertydir)" "$(DESTDIR)$(perldir)" "$(DESTDIR)$(pkgconfigdir)" "$(DESTDIR)$(propertydir)" "$(DESTDIR)$(pythondir)" "$(DESTDIR)$(sampledatadir)" "$(DESTDIR)$(updatedir)" "$(DESTDIR)$(serverincdir)"; do \
- 	  test -z "$$dir" || $(MKDIR_P) "$$dir"; \
- 	done
- install: $(BUILT_SOURCES)
-@@ -10363,13 +10362,13 @@ info: info-am
- 
- info-am:
- 
--install-data-am: install-configDATA install-infDATA \
--	install-initSCRIPTS install-initconfigDATA install-man \
-+install-data-am: install-infDATA \
-+	install-man \
- 	install-mibDATA install-nodist_propertyDATA install-perlDATA \
- 	install-pkgconfigDATA install-propertyDATA install-pythonDATA \
--	install-sampledataDATA install-schemaDATA \
-+	install-sampledataDATA \
- 	install-serverLTLIBRARIES install-serverincHEADERS \
--	install-serverpluginLTLIBRARIES install-systemdsystemunitDATA \
-+	install-serverpluginLTLIBRARIES \
- 	install-taskSCRIPTS install-updateDATA install-updateSCRIPTS
- 
- install-dvi: install-dvi-am
--- 
-2.1.4
-