From 7cbf3a27de3bcb9d090a5ef205f238c2e69e0786 Mon Sep 17 00:00:00 2001
From: Robin Gloster <mail@glob.in>
Date: Thu, 28 Sep 2017 00:52:58 +0200
Subject: [PATCH] freebayes: clean up build

---
 .../applications/science/biology/freebayes/builder.sh | 11 -----------
 .../science/biology/freebayes/default.nix             |  6 ++++--
 2 files changed, 4 insertions(+), 13 deletions(-)
 delete mode 100644 pkgs/applications/science/biology/freebayes/builder.sh

diff --git a/pkgs/applications/science/biology/freebayes/builder.sh b/pkgs/applications/science/biology/freebayes/builder.sh
deleted file mode 100644
index a9f56e77d7e3..000000000000
--- a/pkgs/applications/science/biology/freebayes/builder.sh
+++ /dev/null
@@ -1,11 +0,0 @@
-source $stdenv/setup
-
-unpackPhase
-
-cd freebayes-*
-
-make
-
-mkdir -p $out/bin
-cp bin/freebayes bin/bamleftalign $out/bin
-cp scripts/* $out/bin
diff --git a/pkgs/applications/science/biology/freebayes/default.nix b/pkgs/applications/science/biology/freebayes/default.nix
index ec11e4ccb307..99d2dfa55ddd 100644
--- a/pkgs/applications/science/biology/freebayes/default.nix
+++ b/pkgs/applications/science/biology/freebayes/default.nix
@@ -13,9 +13,11 @@ stdenv.mkDerivation rec {
     fetchSubmodules = true;
   };
 
-  buildInputs = [ cmake gcc zlib bzip2 lzma ];
+  buildInputs = [ zlib bzip2 lzma ];
 
-  builder = ./builder.sh;
+  installPhase = ''
+    install -vD bin/freebayes bin/bamleftalign scripts/* -t $out/bin
+  '';
 
   meta = with stdenv.lib; {
     description = "Bayesian haplotype-based polymorphism discovery and genotyping";