From 652448f25bb4a21e6d7c8ab5fc8e9a52f3430e0d Mon Sep 17 00:00:00 2001
From: Florian Klink <flokli@flokli.de>
Date: Tue, 2 Jul 2019 23:12:27 +0200
Subject: [PATCH] python.pkgs.scikits-odes: init at 2.4.0-9-g93075ae

---
 .../python-modules/scikits-odes/default.nix   | 55 +++++++++++++++++++
 pkgs/top-level/python-packages.nix            |  2 +
 2 files changed, 57 insertions(+)
 create mode 100644 pkgs/development/python-modules/scikits-odes/default.nix

diff --git a/pkgs/development/python-modules/scikits-odes/default.nix b/pkgs/development/python-modules/scikits-odes/default.nix
new file mode 100644
index 000000000000..89ffe334e7ff
--- /dev/null
+++ b/pkgs/development/python-modules/scikits-odes/default.nix
@@ -0,0 +1,55 @@
+{ stdenv
+, lib
+, buildPythonPackage
+, fetchFromGitHub
+, fetchurl
+, cython
+, enum34
+, gfortran
+, isPy3k
+, numpy
+, pytest
+, python
+, scipy
+, sundials_3
+}:
+
+buildPythonPackage rec {
+  pname = "scikits.odes";
+  version = "2.4.0-9-g93075ae";
+
+  # we fetch github instead of Pypi, as we want #104 and #105, which don't apply cleanly on 2.4.0
+  src = fetchFromGitHub {
+    owner = "bmcage";
+    repo = "odes";
+    rev = "93075ae25c409f572f13ca7207fada5706f73c73";
+    sha256 = "161rab7hy6r1a9xw1zby9xhnnmxi0zwdpzxfpjkw9651xn2k5xyw";
+  };
+
+  nativeBuildInputs = [
+    gfortran
+    cython
+  ];
+
+  propagatedBuildInputs = [
+    numpy
+    sundials_3
+    scipy
+  ] ++ lib.optionals (!isPy3k) [ enum34 ];
+
+  doCheck = true;
+  checkInputs = [ pytest ];
+
+  checkPhase = ''
+    cd $out/${python.sitePackages}/scikits/odes/tests
+    pytest
+  '';
+
+  meta = with stdenv.lib; {
+    description = "A scikit offering extra ode/dae solvers, as an extension to what is available in scipy";
+    homepage = https://github.com/bmcage/odes;
+    license = licenses.bsd3;
+    maintainers = with maintainers; [ flokli idontgetoutmuch ];
+    platforms = [ "aarch64-linux" "x86_64-linux" "x86_64-darwin" ];
+  };
+}
diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix
index 2e0ff367f9e7..80e5420bf002 100644
--- a/pkgs/top-level/python-packages.nix
+++ b/pkgs/top-level/python-packages.nix
@@ -4846,6 +4846,8 @@ in {
 
   scikit-build = callPackage ../development/python-modules/scikit-build { };
 
+  scikits-odes = callPackage ../development/python-modules/scikits-odes { };
+
   scikit-optimize = callPackage ../development/python-modules/scikit-optimize { };
 
   scikit-tda = callPackage ../development/python-modules/scikit-tda { };