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bedtools: use python3

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This commit is contained in:
Frederik Rietdijk 2021-03-25 10:42:32 +01:00
parent 15d4161931
commit 5a5cb718a5
1 changed files with 8 additions and 2 deletions
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10
pkgs/applications/science/biology/bedtools/default.nix
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@ -1,4 +1,4 @@
{lib, stdenv, fetchFromGitHub, zlib, python, bzip2, lzma}: {lib, stdenv, fetchFromGitHub, zlib, python3, bzip2, lzma}:
stdenv.mkDerivation rec { stdenv.mkDerivation rec {
pname = "bedtools"; pname = "bedtools";
@ -11,7 +11,13 @@ stdenv.mkDerivation rec {
sha256 = "sha256-NqKldF7ePJn3pT+AkESIQghBKSFFOEBBsTaKEbU+oaQ="; sha256 = "sha256-NqKldF7ePJn3pT+AkESIQghBKSFFOEBBsTaKEbU+oaQ=";
}; };
buildInputs = [ zlib python bzip2 lzma ]; strictDeps = true;
nativeBuildInputs = [
python3
];
buildInputs = [ zlib bzip2 lzma ];
cxx = if stdenv.cc.isClang then "clang++" else "g++"; cxx = if stdenv.cc.isClang then "clang++" else "g++";
cc = if stdenv.cc.isClang then "clang" else "gcc"; cc = if stdenv.cc.isClang then "clang" else "gcc";
buildPhase = "make prefix=$out SHELL=${stdenv.shell} CXX=${cxx} CC=${cc} -j $NIX_BUILD_CORES"; buildPhase = "make prefix=$out SHELL=${stdenv.shell} CXX=${cxx} CC=${cc} -j $NIX_BUILD_CORES";