nixpkgs/pkgs/development/libraries/science/math/lcalc/makefile.patch

diff --git a/src/Makefile b/src/Makefile
index 84e4e88..56ca676 100644
--- a/src/Makefile
+++ b/src/Makefile
@@ -58,7 +58,7 @@ ifeq ($(G5),TRUE)
    #MACHINE_SPECIFIC_FLAGS = -mpowerpc -mpowerpc64 -m64
 endif
 
-CCFLAGS =  -Wa,-W -O3 $(OPENMP_FLAG) -Wno-deprecated $(PREPROCESSOR_DEFINE) $(MACHINE_SPECIFIC_FLAGS) $(EXTRA)
+CCFLAGS = $(CXXFLAGS) $(OPENMP_FLAG) $(PREPROCESSOR_DEFINE) $(MACHINE_SPECIFIC_FLAGS)
 #CCFLAGS =  -Wa,-W -O3 $(OPENMP_FLAG)  $(PREPROCESSOR_DEFINE) $(MACHINE_SPECIFIC_FLAGS) $(EXTRA)
 #CCFLAGS =  -Wa,-W -O2 -fno-exceptions -Wno-deprecated $(PREPROCESSOR_DEFINE) $(MACHINE_SPECIFIC_FLAGS) $(EXTRA)
 
@@ -68,12 +68,12 @@ CCFLAGS =  -Wa,-W -O3 $(OPENMP_FLAG) -Wno-deprecated $(PREPROCESSOR_DEFINE) $(MA
 
 ifeq ($(PARI_DEFINE),-DINCLUDE_PARI)
     #location of pari.h.
-    LOCATION_PARI_H = /usr/local/include/pari #usual location
+    LOCATION_PARI_H = $(PARI_PREFIX)/include/pari #usual location
 
     #location of libpari.a or of libpari.so
     #depending on whether static or dynamic libraries are being used.
     #On mac os x it's the former, on linux I think usually the latter.
-    LOCATION_PARI_LIBRARY = /usr/local/lib #usual location
+    LOCATION_PARI_LIBRARY = $(PARI_PREFIX)/lib #usual location
 else
     #supplied as a dummy so as to avoid more ifeq's below
     LOCATION_PARI_H = .
@@ -89,24 +89,24 @@ INCLUDEFILES= -I../include
 
 ifeq ($(OS_NAME),Darwin)
     LDFLAGS2 =
-    DYN_OPTION=dynamiclib
+    DYN_OPTION=-dynamiclib
 else
-    LDFLAGS1 = -Xlinker -export-dynamic #not sure why pari calls these when linking but on the web I found
+    LDFLAGS1 = #not sure why pari calls these when linking but on the web I found
     #'Libtool provides the `-export-dynamic' link flag (see section Link mode), which does this declaration.
     #You need to use this flag if you are linking a shared library that will be dlopened'
     #see notes below
     #ifeq ($(PARI_DEFINE),-DINCLUDE_PARI)
-       LDFLAGS2 = $(LDFLAGS1) -Xlinker -rpath -Xlinker $(LOCATION_PARI_LIBRARY)
+       LDFLAGS2 = $(LDFLAGS)
     #else
     #    LDFLAGS2 = $(LDFLAGS1)
     #endif
-    DYN_OPTION=shared
+    DYN_OPTION=$(LDFLAGS) -shared -Wl,-soname,libLfunction.so
 endif
 
 ifeq ($(PARI_DEFINE),-DINCLUDE_PARI)
-    LDFLAGS = $(LDFLAGS2) -L$(LOCATION_PARI_LIBRARY) -lpari
+    MYLDFLAGS = $(LDFLAGS2) -L$(LOCATION_PARI_LIBRARY) -lpari
 else
-    LDFLAGS = $(LDFLAGS2)
+    MYLDFLAGS = $(LDFLAGS2)
 endif
 
 
@@ -129,7 +129,8 @@ endif
 #become clear which libraries the computer can find.
 
 
-INSTALL_DIR= /usr/local
+INSTALL_DIR= $(DESTDIR)
+LIB_DIR ?=lib
 
 #object files for the libLfunction library
 OBJ_L = Lglobals.o Lgamma.o Lriemannsiegel.o Lriemannsiegel_blfi.o Ldokchitser.o
@@ -141,9 +142,8 @@ OBJECTS = $(OBJ3)
 
 all:
 #	make print_vars
-	make libLfunction.so
-	make lcalc
-	make examples
+	${MAKE} libLfunction.so
+	${MAKE} lcalc
 #	make find_L
 #	make test
 
@@ -151,7 +151,7 @@ print_vars:
 	@echo OS_NAME = $(OS_NAME)
 
 lcalc: $(OBJECTS)
-	$(CC) $(CCFLAGS) $(INCLUDEFILES) $(OBJECTS) $(LDFLAGS) -o lcalc $(GMP_FLAGS)
+	$(CC) $(CCFLAGS) $(INCLUDEFILES) $(OBJECTS) $(MYLDFLAGS) -o lcalc $(GMP_FLAGS)
 
 examples:
 	$(CC) $(CCFLAGS) $(INCLUDEFILES) example_programs/example.cc libLfunction.so -o example_programs/example $(GMP_FLAGS)
@@ -262,15 +262,18 @@ Lcommandline.o: ../include/Lcommandline_values_zeros.h
 
 
 libLfunction.so: $(OBJ_L)
-	g++ -$(DYN_OPTION)  -o libLfunction.so $(OBJ_L)
+	g++ $(DYN_OPTION) -o libLfunction.so $(OBJ_L)
 
 clean:
 	rm -f *.o lcalc libLfunction.so example_programs/example
 
 install:
-	cp -f lcalc $(INSTALL_DIR)/bin/.
-	cp -f libLfunction.so $(INSTALL_DIR)/lib/.
-	cp -rf ../include $(INSTALL_DIR)/include/Lfunction
+	install -d $(INSTALL_DIR)/bin
+	install -d $(INSTALL_DIR)/$(LIB_DIR)
+	install -d $(INSTALL_DIR)/include/Lfunction
+	install lcalc $(INSTALL_DIR)/bin
+	install libLfunction.so $(INSTALL_DIR)/$(LIB_DIR)
+	install -m 644 -t $(INSTALL_DIR)/include/Lfunction ../include/*.h
 
 
 SRCS = Lcommandline.cc Lcommandline_elliptic.cc Lcommandline_globals.cc Lcommandline_misc.cc Lcommandline_numbertheory.cc Lcommandline_twist.cc Lcommandline_values_zeros.cc Lgamma.cc Lglobals.cc Lmisc.cc Lriemannsiegel.cc Lriemannsiegel_blfi.cc cmdline.c