2019-07-13 01:35:14 +01:00
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{ lib
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, buildPythonPackage
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, fetchPypi
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, cython
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, numpy
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, scipy
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, scikitlearn
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, persim
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, pytest
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}:
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buildPythonPackage rec {
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pname = "ripser";
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2019-10-24 07:47:47 +01:00
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version = "0.4.1";
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2019-07-13 01:35:14 +01:00
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src = fetchPypi {
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inherit pname version;
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2019-10-24 07:47:47 +01:00
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sha256 = "a4015b413c24e3074f82f31771b1eb805e054b8cf444db51ce8ca5afa42cf130";
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2019-07-13 01:35:14 +01:00
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};
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checkInputs = [
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pytest
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];
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propagatedBuildInputs = [
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cython
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numpy
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scipy
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scikitlearn
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persim
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];
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checkPhase = ''
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# specifically needed for darwin
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export HOME=$(mktemp -d)
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mkdir -p $HOME/.matplotlib
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echo "backend: ps" > $HOME/.matplotlib/matplotlibrc
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pytest
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'';
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meta = with lib; {
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description = "A Lean Persistent Homology Library for Python";
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homepage = https://ripser.scikit-tda.org;
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license = licenses.mit;
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maintainers = [ maintainers.costrouc ];
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};
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}
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