2016-06-26 12:47:22 +01:00
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{ stdenv, fetchurl, unzip, jre }:
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stdenv.mkDerivation rec {
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name = "igv-${version}";
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2017-08-01 19:46:31 +01:00
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version = "2.3.98";
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2016-06-26 12:47:22 +01:00
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src = fetchurl {
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url = "http://data.broadinstitute.org/igv/projects/downloads/IGV_${version}.zip";
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2017-08-01 19:46:31 +01:00
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sha256 = "1bjdsvx8jsbcry6v7yfclh3vrlsvaw38f3s9587lklj63zj638l2";
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2016-06-26 12:47:22 +01:00
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};
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buildInputs = [ unzip jre ];
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installPhase = ''
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mkdir -pv $out/{share,bin}
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cp -Rv * $out/share/
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sed -i "s#prefix=.*#prefix=$out/share#g" $out/share/igv.sh
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sed -i 's#java#${jre}/bin/java#g' $out/share/igv.sh
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ln -s $out/share/igv.sh $out/bin/igv
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chmod +x $out/bin/igv
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'';
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meta = with stdenv.lib; {
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homepage = "https://www.broadinstitute.org/igv/";
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description = "A visualization tool for interactive exploration of genomic datasets";
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license = licenses.lgpl21;
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platforms = platforms.unix;
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maintainers = [ maintainers.mimadrid ];
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};
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}
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